Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SNORA44-201ENST00000384584 132 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AL138885.1-201ENST00000405921 675 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 RPL5P18-201ENST00000406671 891 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AL590084.1-201ENST00000407885 387 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 RNA5SP80-201ENST00000410475 111 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 RNA5SP229-201ENST00000410809 99 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 COTL1P1-201ENST00000422309 375 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 MTND4LP10-201ENST00000435146 291 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 RPL23AP22-201ENST00000437556 453 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 EEF1A1P39-201ENST00000440791 250 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 MTND2P20-201ENST00000440805 661 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC026410.2-201ENST00000460281 156 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC096576.1-201ENST00000489014 359 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 UBE2V1P12-201ENST00000503954 474 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC010625.1-201ENST00000511296 403 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC024224.1-201ENST00000538284 609 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 HSPE1P3-201ENST00000559254 309 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 MIR4637-201ENST00000582405 84 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 BNIP3P26-201ENST00000600827 554 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 BDH2P1-201ENST00000602288 736 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC105148.1-201ENST00000604961 409 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC010738.1-201ENST00000604970 987 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 AC100793.4-201ENST00000613683 429 ntBASIC3.32□□□□□ -1.88
HPS4Q9NQG7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HPS4Q9NQG7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AC017071.1-201ENST00000564407 2204 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AP002907.1-201ENST00000606361 1430 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 RNU6-560P-201ENST00000364007 108 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 RNU1-101P-201ENST00000391171 127 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AL356320.2-201ENST00000417263 507 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AC099677.1-201ENST00000420575 175 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 HSPE1P1-201ENST00000421494 318 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 MTCO2P23-201ENST00000425216 680 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 BX890604.2-201ENST00000427883 474 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AC007327.1-201ENST00000447461 264 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 TRGVB-201ENST00000453257 471 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 OFD1P3Y-201ENST00000453312 783 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 snoU13.4-201ENST00000458916 104 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 RPL23AP67-201ENST00000465341 474 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AC096751.1-202ENST00000502691 1067 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AC008885.1-201ENST00000514930 301 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 RNU6-415P-201ENST00000516252 97 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 SNORA64.4-201ENST00000516632 81 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 AADACP1-206ENST00000561502 1193 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 MAGOH2P-202ENST00000584384 429 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 BNIP3P40-201ENST00000596017 556 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 RNU4-5P-201ENST00000607255 135 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 SNORD39.4-201ENST00000620099 78 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.31□□□□□ -1.88
HPS4Q9NQG7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HPS4Q9NQG7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 SNORA7.4-201ENST00000384249 137 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 ERHP2-201ENST00000402323 299 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 MIR1289-1-201ENST00000408836 144 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC109780.2-201ENST00000413467 845 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC079780.1-201ENST00000428259 207 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC236972.1-201ENST00000433225 199 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC004854.1-201ENST00000440356 349 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 TRIM60P18-201ENST00000441518 828 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 MTCO2P25-201ENST00000447065 681 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 ZNF886P-201ENST00000450781 723 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms