Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC079248.2-201ENST00000623779 326 ntBASIC3.41□□□□□ -1.86
CPNE1Q99829 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CPNE1Q99829 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CPNE1Q99829 AL672296.1-201ENST00000427780 2158 ntBASIC3.41□□□□□ -1.86
CPNE1Q99829 TAB3P1-202ENST00000452645 1634 ntBASIC3.41□□□□□ -1.86
CPNE1Q99829 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
CPNE1Q99829 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CPNE1Q99829 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.4□□□□□ -1.86
CPNE1Q99829 AL353746.1-201ENST00000566293 6881 ntBASIC3.4□□□□□ -1.86
CPNE1Q99829 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
CPNE1Q99829 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CPNE1Q99829 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.4□□□□□ -1.86
CPNE1Q99829 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CPNE1Q99829 RNU6-853P-201ENST00000364306 107 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.4□□□□□ -1.87
CPNE1Q99829 DEFB109C-201ENST00000382575 264 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 DEFB109B-201ENST00000382656 264 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 Y_RNA.548-201ENST00000384656 105 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 AL136372.1-201ENST00000403060 228 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 RNU4-72P-201ENST00000410754 173 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 SSXP9-201ENST00000417503 292 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.4□□□□□ -1.87
CPNE1Q99829 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.4□□□□□ -1.87
CPNE1Q99829 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.4□□□□□ -1.87
CPNE1Q99829 ISCA1P2-201ENST00000438679 421 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 AL831737.1-201ENST00000441288 271 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.4□□□□□ -1.87
CPNE1Q99829 AC112653.1-201ENST00000443851 386 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 RAC1P7-201ENST00000445367 377 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 AC073387.1-201ENST00000453261 709 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 HMGN2P16-201ENST00000456802 261 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 RNU7-125P-201ENST00000458760 62 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 AC091564.1-201ENST00000464563 479 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.4□□□□□ -1.87
CPNE1Q99829 AC022483.1-201ENST00000514020 567 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 SNORA31.8-201ENST00000516327 108 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.4□□□□□ -1.87
CPNE1Q99829 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.4□□□□□ -1.87
CPNE1Q99829 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CPNE1Q99829 AP003497.1-201ENST00000528472 562 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.4□□□□□ -1.87
CPNE1Q99829 MRPS36P5-201ENST00000551909 298 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.4□□□□□ -1.87
CPNE1Q99829 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.4□□□□□ -1.87
CPNE1Q99829 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.4□□□□□ -1.87
CPNE1Q99829 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.4□□□□□ -1.87
CPNE1Q99829 MTND3P12-201ENST00000559068 328 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.4□□□□□ -1.87
CPNE1Q99829 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.4□□□□□ -1.87
CPNE1Q99829 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.4□□□□□ -1.87
CPNE1Q99829 AP001004.1-201ENST00000582468 324 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.4□□□□□ -1.87
CPNE1Q99829 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.4□□□□□ -1.87
CPNE1Q99829 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 VIS1.1-201ENST00000610517 203 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.4□□□□□ -1.87
CPNE1Q99829 AC092628.2-201ENST00000622492 339 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 PCMTD1P7-201ENST00000634506 357 ntBASIC3.4□□□□□ -1.87
CPNE1Q99829 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.4□□□□□ -1.87
CPNE1Q99829 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CPNE1Q99829 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.4□□□□□ -1.87
CPNE1Q99829 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPNE1Q99829 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPNE1Q99829 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CPNE1Q99829 RNU6-500P-201ENST00000362349 107 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.39□□□□□ -1.87
CPNE1Q99829 RPL21P17-201ENST00000397467 475 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE1Q99829 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE1Q99829 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.39□□□□□ -1.87
CPNE1Q99829 AC245291.1-201ENST00000419501 328 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AL365203.2-201ENST00000423444 196 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CPNE1Q99829 AC091862.1-201ENST00000438016 1100 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE1Q99829 CDC27P1-201ENST00000445384 715 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE1Q99829 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.39□□□□□ -1.87
CPNE1Q99829 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE1Q99829 AC021678.1-201ENST00000505195 936 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AC112198.1-201ENST00000505369 1220 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE1Q99829 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE1Q99829 RNU6-232P-201ENST00000517144 64 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AC104027.1-201ENST00000521887 300 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE1Q99829 AC013828.2-201ENST00000532487 235 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 SETP2-201ENST00000553886 926 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AC034268.2-201ENST00000571784 482 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE1Q99829 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.39□□□□□ -1.87
CPNE1Q99829 MIR544B-201ENST00000582372 78 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.39□□□□□ -1.87
CPNE1Q99829 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.39□□□□□ -1.87
CPNE1Q99829 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.39□□□□□ -1.87
CPNE1Q99829 AC112187.2-201ENST00000604345 283 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 MIR6130-201ENST00000619419 109 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AL603755.1-201ENST00000619504 163 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AL161637.1-201ENST00000622380 412 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 AC019226.2-201ENST00000625973 424 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms