Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.8□□□□□ -1.48
CALR3Q96L12 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.8□□□□□ -1.48
CALR3Q96L12 AC108860.1-201ENST00000484521 383 ntBASIC5.8□□□□□ -1.48
CALR3Q96L12 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.8□□□□□ -1.48
CALR3Q96L12 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.8□□□□□ -1.48
CALR3Q96L12 APOOP4-201ENST00000513530 597 ntBASIC5.8□□□□□ -1.48
CALR3Q96L12 SNORA31.20-201ENST00000517111 133 ntBASIC5.8□□□□□ -1.48
CALR3Q96L12 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.8□□□□□ -1.48
CALR3Q96L12 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.8□□□□□ -1.48
CALR3Q96L12 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.8□□□□□ -1.48
CALR3Q96L12 AC022968.1-201ENST00000567372 442 ntBASIC5.8□□□□□ -1.48
CALR3Q96L12 MIR548AC-201ENST00000585049 88 ntBASIC5.8□□□□□ -1.48
CALR3Q96L12 AC108738.1-201ENST00000603703 237 ntBASIC5.8□□□□□ -1.48
CALR3Q96L12 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.8□□□□□ -1.48
CALR3Q96L12 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CALR3Q96L12 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CALR3Q96L12 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.8□□□□□ -1.48
CALR3Q96L12 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CALR3Q96L12 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CALR3Q96L12 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CALR3Q96L12 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CALR3Q96L12 SAMMSON-226ENST00000642089 1582 ntBASIC5.8□□□□□ -1.48
CALR3Q96L12 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CALR3Q96L12 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CALR3Q96L12 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CALR3Q96L12 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CALR3Q96L12 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CALR3Q96L12 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CALR3Q96L12 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.79□□□□□ -1.48
CALR3Q96L12 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CALR3Q96L12 AC104623.2-202ENST00000623477 4002 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CALR3Q96L12 UBE2L2-201ENST00000254302 429 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 AC138393.1-203ENST00000327086 343 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 MIR375-201ENST00000362103 64 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CALR3Q96L12 Y_RNA.463-201ENST00000384271 102 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 RNU6-1106P-201ENST00000390845 107 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 AC063979.1-201ENST00000415539 377 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 MCFD2P1-201ENST00000417812 300 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.79□□□□□ -1.48
CALR3Q96L12 UBE2V1P4-201ENST00000425374 344 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 AL451062.2-201ENST00000427515 271 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.79□□□□□ -1.48
CALR3Q96L12 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.79□□□□□ -1.48
CALR3Q96L12 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.79□□□□□ -1.48
CALR3Q96L12 RPL21P23-201ENST00000446654 460 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.79□□□□□ -1.48
CALR3Q96L12 AL450023.1-201ENST00000450868 751 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.79□□□□□ -1.48
CALR3Q96L12 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.79□□□□□ -1.48
CALR3Q96L12 AC118758.1-202ENST00000454719 225 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 SNORD5.1-201ENST00000458800 75 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 ACA64.1-201ENST00000459171 127 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 AL135752.1-201ENST00000479477 471 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.79□□□□□ -1.48
CALR3Q96L12 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CALR3Q96L12 RNU6-1137P-201ENST00000517073 99 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 CDH12P4-201ENST00000517835 295 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 CDH12P3-201ENST00000517935 295 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 CDH12P1-201ENST00000518435 295 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.79□□□□□ -1.48
CALR3Q96L12 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.79□□□□□ -1.48
CALR3Q96L12 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.79□□□□□ -1.48
CALR3Q96L12 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.79□□□□□ -1.48
CALR3Q96L12 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.79□□□□□ -1.48
CALR3Q96L12 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CALR3Q96L12 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CALR3Q96L12 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.79□□□□□ -1.48
CALR3Q96L12 AC106900.2-201ENST00000604994 317 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 AL161423.1-201ENST00000613700 262 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 MIR6806-201ENST00000622141 64 ntBASIC5.79□□□□□ -1.48
CALR3Q96L12 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.79□□□□□ -1.48
CALR3Q96L12 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.79□□□□□ -1.48
CALR3Q96L12 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CALR3Q96L12 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CALR3Q96L12 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CALR3Q96L12 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CALR3Q96L12 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
CALR3Q96L12 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CALR3Q96L12 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CALR3Q96L12 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CALR3Q96L12 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CALR3Q96L12 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CALR3Q96L12 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CALR3Q96L12 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CALR3Q96L12 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.78□□□□□ -1.48
CALR3Q96L12 Y_RNA.158-201ENST00000363651 101 ntBASIC5.78□□□□□ -1.48
CALR3Q96L12 RNA5SP232-201ENST00000364144 119 ntBASIC5.78□□□□□ -1.48
CALR3Q96L12 Y_RNA.252-201ENST00000364556 101 ntBASIC5.78□□□□□ -1.48
CALR3Q96L12 RN7SKP153-201ENST00000365026 316 ntBASIC5.78□□□□□ -1.48
CALR3Q96L12 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CALR3Q96L12 RNU6-1032P-201ENST00000384100 107 ntBASIC5.78□□□□□ -1.48
CALR3Q96L12 Y_RNA.473-201ENST00000384333 102 ntBASIC5.78□□□□□ -1.48
CALR3Q96L12 MIR578-201ENST00000384828 96 ntBASIC5.78□□□□□ -1.48
CALR3Q96L12 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CALR3Q96L12 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.78□□□□□ -1.48
CALR3Q96L12 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.78□□□□□ -1.48
CALR3Q96L12 AL360271.2-201ENST00000447710 161 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms