Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 SNX18P3-202ENST00000565670 1750 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HLA-CQ95604 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-CQ95604 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-CQ95604 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.02□□□□□ -1.45
HLA-CQ95604 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 AC127070.3-201ENST00000503695 3263 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 THAP12P5-201ENST00000405864 2275 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 RLIMP1-201ENST00000339626 1680 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 AC100778.3-201ENST00000580060 1750 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 MAPK10-338ENST00000641647 3362 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 RNU6-708P-201ENST00000384217 107 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 RNU2-43P-201ENST00000410306 190 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.01□□□□□ -1.45
HLA-CQ95604 AC008065.1-201ENST00000428525 348 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-CQ95604 AL389915.2-201ENST00000454576 441 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 RPS29P26-201ENST00000477483 171 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 RN7SL570P-201ENST00000484405 292 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 RN7SL447P-201ENST00000494711 245 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 AC107393.1-201ENST00000512403 346 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 HIGD1AP3-201ENST00000515857 278 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 FKBP1BP1-201ENST00000553366 325 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 AC025884.1-201ENST00000556034 378 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 AC136932.1-201ENST00000574771 208 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 RN7SL52P-201ENST00000584271 284 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 AC020765.1-201ENST00000604296 328 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-CQ95604 RN7SL722P-201ENST00000617780 284 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 RN7SL565P-201ENST00000618246 284 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-CQ95604 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HLA-CQ95604 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-CQ95604 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-CQ95604 AL359854.1-201ENST00000614203 1594 ntBASIC6.01□□□□□ -1.45
HLA-CQ95604 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
HLA-CQ95604 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6□□□□□ -1.45
HLA-CQ95604 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-CQ95604 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6□□□□□ -1.45
HLA-CQ95604 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HLA-CQ95604 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-CQ95604 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-CQ95604 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6□□□□□ -1.45
HLA-CQ95604 RNU6-682P-201ENST00000363843 106 ntBASIC6□□□□□ -1.45
HLA-CQ95604 RNA5SP211-201ENST00000365516 117 ntBASIC6□□□□□ -1.45
HLA-CQ95604 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC6□□□□□ -1.45
HLA-CQ95604 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6□□□□□ -1.45
HLA-CQ95604 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6□□□□□ -1.45
HLA-CQ95604 AL591043.1-201ENST00000432461 424 ntBASIC6□□□□□ -1.45
HLA-CQ95604 AC004938.1-201ENST00000438468 308 ntBASIC6□□□□□ -1.45
HLA-CQ95604 MRPL48P1-201ENST00000445390 636 ntBASIC6□□□□□ -1.45
HLA-CQ95604 AC073587.1-201ENST00000447093 876 ntBASIC6□□□□□ -1.45
HLA-CQ95604 SDC4P-201ENST00000453285 601 ntBASIC6□□□□□ -1.45
HLA-CQ95604 PPIAP21-201ENST00000464473 501 ntBASIC6□□□□□ -1.45
HLA-CQ95604 RPL23AP2-201ENST00000471227 466 ntBASIC6□□□□□ -1.45
HLA-CQ95604 RPL23AP40-201ENST00000487630 390 ntBASIC6□□□□□ -1.45
HLA-CQ95604 AL590705.4-201ENST00000532209 134 ntBASIC6□□□□□ -1.45
HLA-CQ95604 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC6□□□□□ -1.45
HLA-CQ95604 HMGN2P47-201ENST00000559378 272 ntBASIC6□□□□□ -1.45
HLA-CQ95604 AC114947.2-201ENST00000565748 2125 ntBASIC6□□□□□ -1.45
HLA-CQ95604 AC072026.1-201ENST00000605023 201 ntBASIC6□□□□□ -1.45
HLA-CQ95604 AC004832.4-201ENST00000608952 331 ntBASIC6□□□□□ -1.45
HLA-CQ95604 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HLA-CQ95604 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6□□□□□ -1.45
HLA-CQ95604 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-CQ95604 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-CQ95604 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-CQ95604 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HLA-CQ95604 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HLA-CQ95604 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
HLA-CQ95604 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-CQ95604 AP000547.3-204ENST00000588548 2523 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-CQ95604 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-CQ95604 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-CQ95604 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
HLA-CQ95604 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-CQ95604 MFSD8-239ENST00000641590 2479 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
HLA-CQ95604 AC105114.1-201ENST00000624795 1862 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 MIR640-201ENST00000385086 96 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms