Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RNA5SP258-201ENST00000362750 119 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 RNU5E-10P-201ENST00000363506 118 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 SNORA40.2-201ENST00000390847 128 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 U3.29-201ENST00000391296 212 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 RPL21P75-201ENST00000396599 483 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 RPL21P28-201ENST00000401418 483 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AL592114.1-201ENST00000403842 483 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AL450338.1-201ENST00000407987 512 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 RNU2-28P-201ENST00000410457 189 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 RNU6-1077P-201ENST00000410506 102 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 RNU2-42P-201ENST00000410697 113 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 SAR1AP4-201ENST00000429225 591 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC022018.1-201ENST00000430685 241 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 GTF2IP7-202ENST00000436677 309 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 MTCO1P53-201ENST00000441633 699 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 MTCO1P48-201ENST00000448024 1096 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 RPL21P39-201ENST00000463605 483 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC011979.1-201ENST00000472300 483 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 RPL21P93-201ENST00000480465 489 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC233702.1-201ENST00000482905 502 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC087190.1-201ENST00000484462 480 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC093591.1-201ENST00000491435 481 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 RPL21P16-201ENST00000495531 483 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC093767.1-201ENST00000504523 156 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 RN7SKP57-201ENST00000517248 293 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC010376.1-201ENST00000522101 334 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 ARL2BPP5-201ENST00000523141 481 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 MIR3605-201ENST00000583214 100 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC015871.2-201ENST00000603605 948 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 PART1_2.1-201ENST00000612397 250 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 CYCSP41-201ENST00000616920 296 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AL355493.4-201ENST00000618530 292 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC018755.4-201ENST00000619715 454 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 AC022306.3-201ENST00000619930 550 ntBASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RTN4IP1Q8WWV3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC092447.6-201ENST00000414578 210 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 SSXP9-201ENST00000417503 292 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC013410.2-201ENST00000422627 201 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 DPRXP1-201ENST00000426312 460 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC079780.1-201ENST00000428259 207 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC012497.1-201ENST00000429392 575 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 NANOGP2-201ENST00000435391 727 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 EXOSC3P1-201ENST00000448649 500 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AL445669.2-201ENST00000454425 421 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC104164.3-201ENST00000467363 1258 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC104472.2-201ENST00000469035 601 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC103975.1-201ENST00000482506 483 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 VPS26AP1-201ENST00000483197 979 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 RNA5SP341-201ENST00000516261 117 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 RN7SKP31-201ENST00000516354 278 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC021451.1-201ENST00000523498 1129 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC022690.1-201ENST00000526681 550 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AP003385.6-201ENST00000531603 374 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 HPRT1P3-201ENST00000539521 576 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 GTF2IP8-201ENST00000560687 584 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC087481.2-201ENST00000565492 330 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC012669.1-201ENST00000603209 283 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 MTND3P19-201ENST00000603825 345 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC006329.2-201ENST00000611491 394 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AL121895.2-201ENST00000619558 447 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 MTND2P41-201ENST00000637599 773 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 Z99496.1-201ENST00000469424 1477 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 AC109315.1-201ENST00000584143 1347 ntBASIC2.37□□□□□ -2.03
RTN4IP1Q8WWV3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms