Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AP000843.1-201ENST00000624880 701 ntBASIC4.47□□□□□ -1.69
CCHCR1Q8TD31 AL159972.1-201ENST00000625150 448 ntBASIC4.47□□□□□ -1.69
CCHCR1Q8TD31 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCHCR1Q8TD31 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCHCR1Q8TD31 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCHCR1Q8TD31 AC025031.4-201ENST00000621248 3271 ntBASIC4.47□□□□□ -1.69
CCHCR1Q8TD31 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.46□□□□□ -1.69
CCHCR1Q8TD31 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCHCR1Q8TD31 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCHCR1Q8TD31 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 SNORA70E-201ENST00000384492 135 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 RNU1-89P-201ENST00000384592 164 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 RNU6-114P-201ENST00000384704 105 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 MIR19A-201ENST00000384878 82 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 RPS4XP8-201ENST00000402039 771 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 AL049693.1-201ENST00000402760 611 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 RNA5SP56-201ENST00000410277 118 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 AC138393.2-201ENST00000414742 246 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 CCDC58P2-201ENST00000417131 366 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 AC005517.2-201ENST00000424673 553 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 AL671855.1-201ENST00000446875 1203 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 DPPA3P1-201ENST00000448050 469 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 AC053481.1-201ENST00000467217 306 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 HMGB1P25-201ENST00000468402 607 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 TMEM248P1-201ENST00000510579 951 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 AC090572.1-201ENST00000519251 160 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 AC008752.3-201ENST00000588113 712 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 AL136295.6-201ENST00000610486 658 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 AL021997.2-201ENST00000615674 271 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 LINC02471-203ENST00000641941 4752 ntBASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCHCR1Q8TD31 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 XIAPP3-201ENST00000312918 795 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 RNU6-989P-201ENST00000362756 107 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 RNU6-108P-201ENST00000365558 107 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 MIR1179-201ENST00000408703 91 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 SNRPFP1-201ENST00000414761 252 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 MTATP6P18-201ENST00000417994 673 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 CYP4F29P-201ENST00000420685 446 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AL139413.1-201ENST00000421309 217 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC007283.2-201ENST00000424739 197 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 BTF3P10-201ENST00000433415 495 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 FTH1P1-201ENST00000437933 532 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AL121601.2-201ENST00000438019 707 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC093156.1-201ENST00000440382 670 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 RAD23BP3-201ENST00000454157 1152 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC006517.1-201ENST00000480485 328 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC017037.2-201ENST00000513850 890 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 RNU6-358P-201ENST00000516564 75 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 IGLVIV-65-201ENST00000517313 360 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC104383.1-201ENST00000530297 370 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 OR4P1P-201ENST00000530808 1136 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC006064.5-201ENST00000541782 248 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC009161.2-201ENST00000624626 138 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 AC005609.4-201ENST00000625071 447 ntBASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CCHCR1Q8TD31 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.44□□□□□ -1.7
CCHCR1Q8TD31 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCHCR1Q8TD31 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.44□□□□□ -1.7
CCHCR1Q8TD31 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCHCR1Q8TD31 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCHCR1Q8TD31 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.44□□□□□ -1.7
CCHCR1Q8TD31 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCHCR1Q8TD31 RNA5SP447-201ENST00000363749 119 ntBASIC4.44□□□□□ -1.7
CCHCR1Q8TD31 RNU5A-8P-201ENST00000364102 114 ntBASIC4.44□□□□□ -1.7
CCHCR1Q8TD31 RNA5SP175-201ENST00000364275 119 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms