Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB1Q86U70 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
LDB1Q86U70 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
LDB1Q86U70 HSPA8P1-201ENST00000425843 1833 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDB1Q86U70 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDB1Q86U70 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
LDB1Q86U70 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LDB1Q86U70 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDB1Q86U70 SNORD6-201ENST00000365444 73 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 U3.20-201ENST00000390909 217 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 RNU2-43P-201ENST00000410306 190 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.52□□□□□ -1.85
LDB1Q86U70 CRYBB2P1-203ENST00000415709 538 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB1Q86U70 RPL37P21-201ENST00000435890 276 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LDB1Q86U70 ZNF114P1-201ENST00000453500 292 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 HMGN2P7-201ENST00000456186 273 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB1Q86U70 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.52□□□□□ -1.85
LDB1Q86U70 AL136097.1-201ENST00000456945 913 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.52□□□□□ -1.85
LDB1Q86U70 RN7SL542P-201ENST00000467147 294 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 RPL7L1P8-201ENST00000469911 741 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AC007537.2-201ENST00000472093 511 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.52□□□□□ -1.85
LDB1Q86U70 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.52□□□□□ -1.85
LDB1Q86U70 AC010486.3-201ENST00000511602 785 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB1Q86U70 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.52□□□□□ -1.85
LDB1Q86U70 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.52□□□□□ -1.85
LDB1Q86U70 RNU6-579P-201ENST00000516879 102 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 RANP9-201ENST00000519957 271 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AC106038.2-201ENST00000520706 568 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB1Q86U70 AC034105.4-201ENST00000568304 277 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.52□□□□□ -1.85
LDB1Q86U70 MIR4307-201ENST00000582802 84 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB1Q86U70 AP000403.1-201ENST00000603349 851 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 Z99497.2-201ENST00000603634 310 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 PRELID3BP8-201ENST00000604148 295 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AC121247.2-201ENST00000604776 136 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AL158211.4-201ENST00000606988 584 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AL357559.1-201ENST00000622228 274 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AC091931.1-201ENST00000623488 728 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 AC068057.2-201ENST00000624047 895 ntBASIC3.52□□□□□ -1.85
LDB1Q86U70 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LDB1Q86U70 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
LDB1Q86U70 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.52□□□□□ -1.85
LDB1Q86U70 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDB1Q86U70 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDB1Q86U70 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB1Q86U70 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
LDB1Q86U70 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
LDB1Q86U70 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LDB1Q86U70 RNY4P24-201ENST00000362735 96 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 RNU6-1078P-201ENST00000364522 103 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 RNU6-114P-201ENST00000384704 105 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 U8.14-201ENST00000390843 143 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 TPMTP3-201ENST00000411928 735 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 AC109780.2-201ENST00000413467 845 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 SSXP9-201ENST00000417503 292 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 MED14P1-201ENST00000430517 648 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 AL365184.2-201ENST00000431139 435 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB1Q86U70 AC004866.2-201ENST00000438285 481 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 THAP5P1-201ENST00000439089 262 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB1Q86U70 MTND1P30-201ENST00000441241 901 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 UBE2D3P4-201ENST00000441973 436 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 RPL7P36-201ENST00000444633 681 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 RAC1P7-201ENST00000445367 377 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB1Q86U70 RPL23AP31-201ENST00000456160 467 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 SETP11-201ENST00000473027 690 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 RPS4XP13-201ENST00000483219 789 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 AC006499.5-201ENST00000505037 514 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB1Q86U70 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.51□□□□□ -1.85
LDB1Q86U70 SAP18P1-201ENST00000512058 390 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB1Q86U70 AC022483.1-201ENST00000514020 567 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 MTCO2P32-201ENST00000514865 403 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 RNU1-95P-201ENST00000516357 160 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 RNU1-128P-201ENST00000516704 160 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 RN7SKP289-201ENST00000517244 295 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 IGKV2-23-201ENST00000518729 323 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.51□□□□□ -1.85
LDB1Q86U70 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB1Q86U70 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.51□□□□□ -1.85
LDB1Q86U70 IGKV2D-19-201ENST00000523346 262 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 AC087373.1-201ENST00000524920 491 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LDB1Q86U70 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.51□□□□□ -1.85
LDB1Q86U70 AC026333.2-201ENST00000542164 106 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB1Q86U70 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB1Q86U70 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms