Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RNU6-89P-201ENST00000606519 100 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC034229.5-201ENST00000624258 185 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC008079.2-201ENST00000623543 20396 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PRPF40BQ6NWY9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
PRPF40BQ6NWY9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
PRPF40BQ6NWY9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 RN7SKP224-201ENST00000364140 325 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 SNORA4.3-201ENST00000365564 137 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 MIR454-201ENST00000390180 115 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AL606923.1-201ENST00000406616 190 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 RN7SKP247-201ENST00000411094 308 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AC011998.1-201ENST00000433403 117 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AC105402.2-201ENST00000438503 358 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 PHBP16-201ENST00000446318 950 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 SCARNA10-201ENST00000459255 330 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 RN7SL98P-201ENST00000462271 300 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 MTND4P17-201ENST00000470444 350 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 UQCRHP4-201ENST00000471686 272 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 SUMO2P20-201ENST00000520803 283 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AP003730.1-201ENST00000524605 285 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AP001330.4-201ENST00000604350 154 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AL591034.3-201ENST00000605511 685 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AL121992.2-201ENST00000606262 256 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 MIR8069-1-201ENST00000616627 86 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 MIR8069-2-201ENST00000621412 86 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AL672167.1-203ENST00000641299 2975 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 AL445487.1-201ENST00000415694 1580 ntBASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRPF40BQ6NWY9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 AC125257.1-201ENST00000560400 2930 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 PHKBP1-201ENST00000450951 1951 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 RNU6-249P-201ENST00000363016 102 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 SNORA62.1-201ENST00000364287 154 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 Y_RNA.373-201ENST00000365600 103 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 RNU4-20P-201ENST00000365601 151 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 Y_RNA.579-201ENST00000390939 94 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 RNU6-278P-201ENST00000390945 109 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 SNORA75.4-201ENST00000391278 119 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 AL583835.1-201ENST00000399570 407 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 RAC1P7-201ENST00000445367 377 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 AC022034.3-201ENST00000471393 478 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 AL139099.1-201ENST00000497398 403 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 AC004062.1-201ENST00000509926 645 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 TTC39CP1-201ENST00000512513 755 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 RNU6-559P-201ENST00000516151 98 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 NARSP2-201ENST00000518524 679 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 OR5B10P-201ENST00000532869 642 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 RN7SL176P-201ENST00000580352 264 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 COX6CP3-201ENST00000580869 223 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 MIR3171-201ENST00000584270 74 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 AL031666.3-201ENST00000609320 1006 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 AC245517.5-201ENST00000611529 162 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms