Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 RPL7P34-201ENST00000433316 712 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AL662791.1-201ENST00000441992 928 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AC078785.3-201ENST00000476607 425 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AC110768.1-201ENST00000509222 400 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AC104619.4-201ENST00000510773 249 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 RNU1-61P-201ENST00000516107 151 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 RN7SKP83-201ENST00000516512 178 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 RN7SKP209-201ENST00000516888 304 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AL121766.1-201ENST00000547436 487 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AC097468.3-201ENST00000607956 456 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AC127502.3-201ENST00000636170 1206 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 U6.98-201ENST00000637157 84 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 AC007671.2-201ENST00000637344 619 ntBASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX30Q5VWJ9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AC005832.2-201ENST00000538921 1430 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AL391417.1-201ENST00000404100 426 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 RNA5SP44-201ENST00000410446 133 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AL365203.2-201ENST00000423444 196 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 HSPD1P21-201ENST00000436541 245 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 RSU1P2-202ENST00000437884 485 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 RPS29P31-201ENST00000446147 164 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 HMGB3P8-201ENST00000449709 577 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AC073387.1-201ENST00000453261 709 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 RPL30P6-201ENST00000475925 342 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AP003497.1-201ENST00000528472 562 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AC013828.2-201ENST00000532487 235 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 MRPS36P5-201ENST00000551909 298 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AP001429.1-201ENST00000602568 530 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 RMST_8.1-201ENST00000610287 165 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AC079248.2-201ENST00000623779 326 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AC244258.1-201ENST00000637553 1071 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 AC119674.1-207ENST00000641355 633 ntBASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX30Q5VWJ9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 RIOK3P1-201ENST00000418778 1528 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 SNORD9-201ENST00000362566 104 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AF228730.1-201ENST00000397972 663 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 MTHFD2P2-201ENST00000407725 247 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 RN7SKP285-201ENST00000410137 318 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 MTND1P21-201ENST00000412991 285 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 SSXP9-201ENST00000417503 292 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 RPL27AP8-201ENST00000424277 446 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AL451062.2-201ENST00000427515 271 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 OR6C5P-201ENST00000452388 923 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC099563.1-201ENST00000456086 418 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 OR6K1P-201ENST00000456766 971 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms