Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PRPF38BQ5VTL8 DOCK11P1-201ENST00000553480 5932 ntBASIC6.13□□□□□ -1.43
PRPF38BQ5VTL8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.13□□□□□ -1.43
PRPF38BQ5VTL8 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PRPF38BQ5VTL8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 RNU6-146P-201ENST00000384602 108 ntBASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 MTCO3P19-201ENST00000415864 321 ntBASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 RPL23AP83-201ENST00000434984 473 ntBASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 AL451136.1-201ENST00000435399 325 ntBASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 FCF1P4-201ENST00000448326 183 ntBASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 IGKV1-32-201ENST00000519290 311 ntBASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 AC004584.2-201ENST00000570407 410 ntBASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 AC012433.1-201ENST00000588916 398 ntBASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 AL391358.1-201ENST00000605342 190 ntBASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 MIR4275-201ENST00000636486 87 ntBASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 AP005435.3-201ENST00000531260 3198 ntBASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PRPF38BQ5VTL8 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 EOGT-210ENST00000615922 1931 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 RNU6-212P-201ENST00000362642 104 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 SNORD27-201ENST00000363981 72 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 RNA5SP30-201ENST00000365552 115 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 Y_RNA.471-201ENST00000384312 102 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 RNU6-325P-201ENST00000411132 105 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 SSXP9-201ENST00000417503 292 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 AC092423.1-201ENST00000430165 186 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 AC090774.1-201ENST00000435925 246 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 AC023141.8-201ENST00000442554 208 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 GEMIN8P3-201ENST00000445417 720 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 PRDX3P3-201ENST00000447765 522 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 RPS11P1-201ENST00000451072 473 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 PRELID3BP1-201ENST00000457142 540 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 AC020593.1-201ENST00000507399 299 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 AC021006.3-201ENST00000530771 192 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 VN1R85P-201ENST00000601587 426 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 FP236240.3-201ENST00000623061 327 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 AL512643.1-201ENST00000635735 524 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 OLMALINC-203ENST00000641087 3779 ntBASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PRPF38BQ5VTL8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 AC138907.8-201ENST00000623981 2256 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 AC005183.1-201ENST00000603687 1979 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 RNU6-774P-201ENST00000363238 107 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 SAR1AP2-201ENST00000392696 594 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 RNU2-43P-201ENST00000410306 190 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 RAC1P3-201ENST00000416129 580 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 PPP1R11P2-201ENST00000423543 382 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 RPS27AP12-201ENST00000429552 465 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 OR6D1P-201ENST00000436165 939 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 RPL7L1P1-201ENST00000448259 785 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 CEACAMP6-201ENST00000452007 574 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 NIP7P2-201ENST00000485801 544 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 MRPS33P2-201ENST00000507850 322 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 SNRPGP16-201ENST00000533275 226 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 AC024940.3-201ENST00000538551 316 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms