Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AL391813.2-201ENST00000609113 322 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AC063943.3-201ENST00000615562 356 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AC092794.2-201ENST00000620933 563 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AP006248.2-201ENST00000623309 592 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 OR5J1P-201ENST00000313544 939 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 Y_RNA.70-201ENST00000362886 110 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 SNORA72.1-201ENST00000363485 129 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 RN7SKP44-201ENST00000363602 316 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 Y_RNA.573-201ENST00000384763 105 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 BTBD10P2-201ENST00000404779 676 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 RNU6-628P-201ENST00000410675 107 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 RNU2-15P-201ENST00000410692 191 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 RPS15AP12-201ENST00000419498 388 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC007283.2-201ENST00000424739 197 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AL117339.2-201ENST00000430475 180 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 RPL12P46-201ENST00000436610 195 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AL121601.2-201ENST00000438019 707 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 RPL21P89-201ENST00000444021 467 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AL162151.2-201ENST00000448875 158 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 IFNWP4-201ENST00000453148 294 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 MTND2P24-201ENST00000453434 806 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AP001992.1-205ENST00000462248 379 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 RPS4XP10-201ENST00000465034 731 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 RPS20P21-201ENST00000466859 343 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC110792.1-201ENST00000491826 472 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC010587.1-201ENST00000505809 469 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC109635.3-201ENST00000529536 185 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC022968.1-201ENST00000567372 442 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC009101.1-201ENST00000568135 242 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC005730.3-201ENST00000583067 366 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 MIR6868-201ENST00000611215 58 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC002553.4-201ENST00000616896 331 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 AC009033.1-201ENST00000624279 431 ntBASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC178Q5BJE1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 PHKBP1-201ENST00000450951 1951 ntBASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 IQCB2P-201ENST00000401788 1633 ntBASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 MARK2P15-201ENST00000432204 2186 ntBASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 AC114546.3-201ENST00000623582 1734 ntBASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 FRG1BP-201ENST00000278882 761 ntBASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 RNY4P16-201ENST00000364768 94 ntBASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 RNU6-483P-201ENST00000384088 108 ntBASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 SNORA3C-201ENST00000408792 125 ntBASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 AC004552.1-201ENST00000419089 348 ntBASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 CYP4F29P-201ENST00000420685 446 ntBASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 AC112653.1-201ENST00000443851 386 ntBASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC178Q5BJE1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms