Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AK6P1-201ENST00000540219 478 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.04□□□□□ -1.76
SUMO3P55854 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.04□□□□□ -1.76
SUMO3P55854 SNORA59B-202ENST00000578183 701 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.04□□□□□ -1.76
SUMO3P55854 SLC25A36P1-201ENST00000590111 465 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.04□□□□□ -1.76
SUMO3P55854 AL670379.6-201ENST00000603753 252 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AC079587.1-201ENST00000603846 277 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AL670379.11-201ENST00000604059 253 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AC067959.1-201ENST00000604334 379 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AC008162.1-201ENST00000604718 254 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AL670379.1-201ENST00000604752 252 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AL670379.5-201ENST00000605253 252 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AL670379.12-201ENST00000605291 253 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AL670379.8-201ENST00000605353 252 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AL670379.7-201ENST00000605823 252 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AC020634.1-201ENST00000608701 549 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 C2orf27A-204ENST00000623058 969 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 AC067931.1-201ENST00000624190 671 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 MIR3688-2-201ENST00000636963 87 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 MIR1321-201ENST00000637766 79 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SUMO3P55854 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SUMO3P55854 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SUMO3P55854 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SUMO3P55854 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SUMO3P55854 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SUMO3P55854 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SUMO3P55854 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SUMO3P55854 AC116096.1-201ENST00000566804 2314 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 USP8P1-201ENST00000494673 3183 ntBASIC4.04□□□□□ -1.76
SUMO3P55854 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SUMO3P55854 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.03□□□□□ -1.76
SUMO3P55854 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 OR5P1P-201ENST00000299512 925 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SUMO3P55854 SNORA36C-201ENST00000384289 132 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 MIR585-201ENST00000384887 94 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 MIR1-2-201ENST00000384961 85 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 RNU6-780P-201ENST00000391030 104 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 RNU2-39P-201ENST00000410604 198 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.03□□□□□ -1.76
SUMO3P55854 MTND1P23-201ENST00000416931 372 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 RPEP3-201ENST00000425462 676 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 RPL21P66-201ENST00000426566 466 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.03□□□□□ -1.76
SUMO3P55854 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 AL139415.2-201ENST00000431968 163 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 AC011998.1-201ENST00000433403 117 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 AC000111.3-201ENST00000433478 193 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 RPL36AP6-201ENST00000435770 321 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SUMO3P55854 RPS15AP9-201ENST00000439856 381 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.03□□□□□ -1.76
SUMO3P55854 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.03□□□□□ -1.76
SUMO3P55854 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.03□□□□□ -1.76
SUMO3P55854 HSPE1P6-201ENST00000479457 291 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 RN7SL432P-201ENST00000484057 298 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 AC108860.1-201ENST00000484521 383 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.03□□□□□ -1.76
SUMO3P55854 RNU6-390P-201ENST00000516259 103 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 SNORA31.8-201ENST00000516327 108 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 RNU6-840P-201ENST00000517275 65 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.03□□□□□ -1.76
SUMO3P55854 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.03□□□□□ -1.76
SUMO3P55854 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 SDR42E1P2-201ENST00000614861 481 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 MIR7703-201ENST00000620784 77 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 AL356321.1-201ENST00000621360 228 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.03□□□□□ -1.76
SUMO3P55854 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 ZNF680P1-201ENST00000436625 1469 ntBASIC4.03□□□□□ -1.76
SUMO3P55854 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SUMO3P55854 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.03□□□□□ -1.76
SUMO3P55854 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.02□□□□□ -1.77
SUMO3P55854 SDAD1P2-201ENST00000441308 2028 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
SUMO3P55854 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SUMO3P55854 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SUMO3P55854 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.02□□□□□ -1.77
SUMO3P55854 RNU6-606P-201ENST00000384721 111 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SUMO3P55854 MIR1277-201ENST00000408536 78 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.02□□□□□ -1.77
SUMO3P55854 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SUMO3P55854 RPS23P10-201ENST00000416185 486 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.02□□□□□ -1.77
SUMO3P55854 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.02□□□□□ -1.77
SUMO3P55854 PDSS1P1-201ENST00000422953 1114 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 RAC1P6-201ENST00000423911 575 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms