Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC107016.1-201ENST00000550463 337 ntBASIC4.25□□□□□ -1.73
NEK3P51956 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.25□□□□□ -1.73
NEK3P51956 OR4H12P-201ENST00000556269 907 ntBASIC4.25□□□□□ -1.73
NEK3P51956 AL360157.1-201ENST00000565962 87 ntBASIC4.25□□□□□ -1.73
NEK3P51956 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.25□□□□□ -1.73
NEK3P51956 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.25□□□□□ -1.73
NEK3P51956 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.25□□□□□ -1.73
NEK3P51956 CKS1BP3-201ENST00000600888 237 ntBASIC4.25□□□□□ -1.73
NEK3P51956 AL606834.2-201ENST00000602954 668 ntBASIC4.25□□□□□ -1.73
NEK3P51956 AC064872.1-201ENST00000604823 1072 ntBASIC4.25□□□□□ -1.73
NEK3P51956 RN7SKP299-201ENST00000606679 301 ntBASIC4.25□□□□□ -1.73
NEK3P51956 AC109347.2-201ENST00000610220 349 ntBASIC4.25□□□□□ -1.73
NEK3P51956 AC131902.3-201ENST00000611767 581 ntBASIC4.25□□□□□ -1.73
NEK3P51956 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
NEK3P51956 FAM35DP-201ENST00000323387 2712 ntBASIC4.25□□□□□ -1.73
NEK3P51956 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.25□□□□□ -1.73
NEK3P51956 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
NEK3P51956 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.24□□□□□ -1.73
NEK3P51956 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NEK3P51956 RNU1-13P-201ENST00000384499 162 ntBASIC4.24□□□□□ -1.73
NEK3P51956 SNORA40.3-201ENST00000390964 122 ntBASIC4.24□□□□□ -1.73
NEK3P51956 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NEK3P51956 AC110754.1-201ENST00000399740 601 ntBASIC4.24□□□□□ -1.73
NEK3P51956 TXNP7-201ENST00000406296 293 ntBASIC4.24□□□□□ -1.73
NEK3P51956 SNORA3C-201ENST00000408792 125 ntBASIC4.24□□□□□ -1.73
NEK3P51956 RN7SKP33-201ENST00000410942 340 ntBASIC4.24□□□□□ -1.73
NEK3P51956 RPS3AP3-201ENST00000411933 242 ntBASIC4.24□□□□□ -1.73
NEK3P51956 UBE2FP1-201ENST00000416536 447 ntBASIC4.24□□□□□ -1.73
NEK3P51956 SPA17P1-201ENST00000416656 452 ntBASIC4.24□□□□□ -1.73
NEK3P51956 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.24□□□□□ -1.73
NEK3P51956 USP12PX-201ENST00000432383 1057 ntBASIC4.24□□□□□ -1.73
NEK3P51956 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.24□□□□□ -1.73
NEK3P51956 SNORA71B-202ENST00000439232 272 ntBASIC4.24□□□□□ -1.73
NEK3P51956 AC005094.1-201ENST00000440420 368 ntBASIC4.24□□□□□ -1.73
NEK3P51956 TXNP1-201ENST00000441872 371 ntBASIC4.24□□□□□ -1.73
NEK3P51956 AL662791.1-201ENST00000441992 928 ntBASIC4.24□□□□□ -1.73
NEK3P51956 MTND6P13-201ENST00000443510 523 ntBASIC4.24□□□□□ -1.73
NEK3P51956 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.24□□□□□ -1.73
NEK3P51956 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.24□□□□□ -1.73
NEK3P51956 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.24□□□□□ -1.73
NEK3P51956 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.24□□□□□ -1.73
NEK3P51956 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.24□□□□□ -1.73
NEK3P51956 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.24□□□□□ -1.73
NEK3P51956 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.24□□□□□ -1.73
NEK3P51956 AP002453.2-201ENST00000533503 320 ntBASIC4.24□□□□□ -1.73
NEK3P51956 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NEK3P51956 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.24□□□□□ -1.73
NEK3P51956 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.24□□□□□ -1.73
NEK3P51956 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.24□□□□□ -1.73
NEK3P51956 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.24□□□□□ -1.73
NEK3P51956 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.24□□□□□ -1.73
NEK3P51956 AC067959.1-201ENST00000604334 379 ntBASIC4.24□□□□□ -1.73
NEK3P51956 HMGB1P50-201ENST00000605814 607 ntBASIC4.24□□□□□ -1.73
NEK3P51956 AC064807.4-201ENST00000607201 407 ntBASIC4.24□□□□□ -1.73
NEK3P51956 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.24□□□□□ -1.73
NEK3P51956 AL110115.1-201ENST00000614396 364 ntBASIC4.24□□□□□ -1.73
NEK3P51956 MIR7702-201ENST00000621931 59 ntBASIC4.24□□□□□ -1.73
NEK3P51956 AC090582.1-201ENST00000636321 199 ntBASIC4.24□□□□□ -1.73
NEK3P51956 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NEK3P51956 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NEK3P51956 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.24□□□□□ -1.73
NEK3P51956 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NEK3P51956 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEK3P51956 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEK3P51956 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEK3P51956 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.23□□□□□ -1.73
NEK3P51956 SPRR2C-201ENST00000290702 219 ntBASIC4.23□□□□□ -1.73
NEK3P51956 Y_RNA.51-201ENST00000362725 102 ntBASIC4.23□□□□□ -1.73
NEK3P51956 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEK3P51956 ELOCP17-201ENST00000414751 326 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.23□□□□□ -1.73
NEK3P51956 AC008850.1-201ENST00000427546 362 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AC137499.1-201ENST00000427602 88 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.23□□□□□ -1.73
NEK3P51956 AC011742.1-201ENST00000431448 434 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.23□□□□□ -1.73
NEK3P51956 OR4C10P-201ENST00000434991 931 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.23□□□□□ -1.73
NEK3P51956 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.23□□□□□ -1.73
NEK3P51956 HSFY6P-201ENST00000445573 403 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.23□□□□□ -1.73
NEK3P51956 MTND1P27-201ENST00000451117 902 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.23□□□□□ -1.73
NEK3P51956 RNA5SP246-201ENST00000458909 119 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AC008481.1-201ENST00000463278 396 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.23□□□□□ -1.73
NEK3P51956 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.23□□□□□ -1.73
NEK3P51956 ARL2BPP4-201ENST00000506854 471 ntBASIC4.23□□□□□ -1.73
NEK3P51956 CBX3P3-201ENST00000508108 532 ntBASIC4.23□□□□□ -1.73
NEK3P51956 ARL2BPP6-201ENST00000512757 439 ntBASIC4.23□□□□□ -1.73
NEK3P51956 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.23□□□□□ -1.73
NEK3P51956 GMPSP1-201ENST00000514075 579 ntBASIC4.23□□□□□ -1.73
NEK3P51956 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
NEK3P51956 Y_RNA.672-201ENST00000516289 104 ntBASIC4.23□□□□□ -1.73
NEK3P51956 SNORA70.16-201ENST00000516390 95 ntBASIC4.23□□□□□ -1.73
NEK3P51956 RNU6-840P-201ENST00000517275 65 ntBASIC4.23□□□□□ -1.73
NEK3P51956 FAM60DP-201ENST00000524174 632 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AC008489.1-201ENST00000524271 483 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AP001804.3-201ENST00000525146 880 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms