Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.99□□□□□ -1.61
CCNFP41002 FABP7P2-201ENST00000429946 379 ntBASIC4.99□□□□□ -1.61
CCNFP41002 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.99□□□□□ -1.61
CCNFP41002 AC020550.1-201ENST00000447385 163 ntBASIC4.99□□□□□ -1.61
CCNFP41002 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.99□□□□□ -1.61
CCNFP41002 PPIAP3-201ENST00000450588 505 ntBASIC4.99□□□□□ -1.61
CCNFP41002 AC009963.2-201ENST00000453431 138 ntBASIC4.99□□□□□ -1.61
CCNFP41002 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.99□□□□□ -1.61
CCNFP41002 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNFP41002 RN7SL517P-201ENST00000462240 305 ntBASIC4.99□□□□□ -1.61
CCNFP41002 RN7SL515P-201ENST00000463999 297 ntBASIC4.99□□□□□ -1.61
CCNFP41002 RN7SL799P-201ENST00000475891 298 ntBASIC4.99□□□□□ -1.61
CCNFP41002 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNFP41002 TRBVA-201ENST00000498804 316 ntBASIC4.99□□□□□ -1.61
CCNFP41002 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNFP41002 NDUFB5P1-201ENST00000508134 564 ntBASIC4.99□□□□□ -1.61
CCNFP41002 KLHL2P1-201ENST00000508691 521 ntBASIC4.99□□□□□ -1.61
CCNFP41002 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.99□□□□□ -1.61
CCNFP41002 RN7SKP46-201ENST00000515942 234 ntBASIC4.99□□□□□ -1.61
CCNFP41002 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.99□□□□□ -1.61
CCNFP41002 AC012339.2-201ENST00000523996 453 ntBASIC4.99□□□□□ -1.61
CCNFP41002 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.99□□□□□ -1.61
CCNFP41002 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNFP41002 AC211433.2-201ENST00000608433 387 ntBASIC4.99□□□□□ -1.61
CCNFP41002 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNFP41002 AL353662.3-201ENST00000625131 237 ntBASIC4.99□□□□□ -1.61
CCNFP41002 OR52H1-202ENST00000641796 1061 ntBASIC4.99□□□□□ -1.61
CCNFP41002 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNFP41002 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNFP41002 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
CCNFP41002 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNFP41002 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNFP41002 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.99□□□□□ -1.61
CCNFP41002 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNFP41002 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CCNFP41002 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.98□□□□□ -1.61
CCNFP41002 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.98□□□□□ -1.61
CCNFP41002 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCNFP41002 RNU6-960P-201ENST00000364056 120 ntBASIC4.98□□□□□ -1.61
CCNFP41002 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCNFP41002 Y_RNA.445-201ENST00000384168 102 ntBASIC4.98□□□□□ -1.61
CCNFP41002 RNU6-754P-201ENST00000391166 107 ntBASIC4.98□□□□□ -1.61
CCNFP41002 SOD2P1-201ENST00000396543 562 ntBASIC4.98□□□□□ -1.61
CCNFP41002 RN7SKP114-201ENST00000410327 279 ntBASIC4.98□□□□□ -1.61
CCNFP41002 RNU4-65P-201ENST00000410473 140 ntBASIC4.98□□□□□ -1.61
CCNFP41002 RNU6-370P-201ENST00000411008 104 ntBASIC4.98□□□□□ -1.61
CCNFP41002 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.98□□□□□ -1.61
CCNFP41002 GJA6P-201ENST00000415117 1042 ntBASIC4.98□□□□□ -1.61
CCNFP41002 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.98□□□□□ -1.61
CCNFP41002 RPL26P29-201ENST00000415623 438 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.98□□□□□ -1.61
CCNFP41002 RAC1P6-201ENST00000423911 575 ntBASIC4.98□□□□□ -1.61
CCNFP41002 EIF4HP2-201ENST00000424380 563 ntBASIC4.98□□□□□ -1.61
CCNFP41002 RPL36AP6-201ENST00000435770 321 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.98□□□□□ -1.61
CCNFP41002 RNU7-66P-201ENST00000459469 62 ntBASIC4.98□□□□□ -1.61
CCNFP41002 RPL35AP28-201ENST00000459730 331 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AC130509.1-201ENST00000464158 433 ntBASIC4.98□□□□□ -1.61
CCNFP41002 RPL21P8-201ENST00000465083 535 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AC108751.2-201ENST00000469993 231 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AC022795.1-201ENST00000473808 480 ntBASIC4.98□□□□□ -1.61
CCNFP41002 RPS18P6-201ENST00000476880 458 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AC012181.1-201ENST00000479895 423 ntBASIC4.98□□□□□ -1.61
CCNFP41002 RBBP4P6-201ENST00000508098 202 ntBASIC4.98□□□□□ -1.61
CCNFP41002 RNU6-390P-201ENST00000516259 103 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AC103783.1-201ENST00000520506 373 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.98□□□□□ -1.61
CCNFP41002 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.98□□□□□ -1.61
CCNFP41002 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.98□□□□□ -1.61
CCNFP41002 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.98□□□□□ -1.61
CCNFP41002 MIR4790-201ENST00000577799 79 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.98□□□□□ -1.61
CCNFP41002 BNIP3P25-201ENST00000596023 559 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.98□□□□□ -1.61
CCNFP41002 AC008162.1-201ENST00000604718 254 ntBASIC4.98□□□□□ -1.61
CCNFP41002 AL670379.4-201ENST00000605279 254 ntBASIC4.98□□□□□ -1.61
CCNFP41002 Z82243.1-201ENST00000609432 473 ntBASIC4.98□□□□□ -1.61
CCNFP41002 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.98□□□□□ -1.61
CCNFP41002 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CCNFP41002 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CCNFP41002 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCNFP41002 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCNFP41002 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCNFP41002 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.98□□□□□ -1.61
CCNFP41002 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
CCNFP41002 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCNFP41002 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCNFP41002 MTCO1P12-201ENST00000414273 1543 ntBASIC4.97□□□□□ -1.61
CCNFP41002 TPTE2P4-201ENST00000258589 1605 ntBASIC4.97□□□□□ -1.61
CCNFP41002 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCNFP41002 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
CCNFP41002 OR51H2P-202ENST00000641424 3046 ntBASIC4.97□□□□□ -1.61
CCNFP41002 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCNFP41002 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.97□□□□□ -1.61
CCNFP41002 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCNFP41002 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.97□□□□□ -1.61
CCNFP41002 SNORD113-7-201ENST00000363762 77 ntBASIC4.97□□□□□ -1.61
CCNFP41002 RNY4P36-201ENST00000391116 96 ntBASIC4.97□□□□□ -1.61
CCNFP41002 RN7SKP125-201ENST00000410481 302 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms