Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.93□□□□□ -1.94
RETP07949 OFD1P18Y-201ENST00000420889 959 ntBASIC2.93□□□□□ -1.94
RETP07949 RNF2P1-201ENST00000442955 1010 ntBASIC2.93□□□□□ -1.94
RETP07949 Z96811.1-201ENST00000445880 108 ntBASIC2.93□□□□□ -1.94
RETP07949 snoU13.3-201ENST00000459441 104 ntBASIC2.93□□□□□ -1.94
RETP07949 RPS23P3-201ENST00000470993 430 ntBASIC2.93□□□□□ -1.94
RETP07949 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.93□□□□□ -1.94
RETP07949 RNF138P1-201ENST00000502765 546 ntBASIC2.93□□□□□ -1.94
RETP07949 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
RETP07949 AC008413.1-201ENST00000511864 177 ntBASIC2.93□□□□□ -1.94
RETP07949 AC034159.1-201ENST00000513885 583 ntBASIC2.93□□□□□ -1.94
RETP07949 HMGB1P1-201ENST00000522557 636 ntBASIC2.93□□□□□ -1.94
RETP07949 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.93□□□□□ -1.94
RETP07949 AC124293.1-201ENST00000530034 493 ntBASIC2.93□□□□□ -1.94
RETP07949 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.93□□□□□ -1.94
RETP07949 AC006518.2-201ENST00000542513 940 ntBASIC2.93□□□□□ -1.94
RETP07949 AC107954.1-201ENST00000565906 727 ntBASIC2.93□□□□□ -1.94
RETP07949 AC126365.2-201ENST00000580630 379 ntBASIC2.93□□□□□ -1.94
RETP07949 AC068620.3-201ENST00000602749 560 ntBASIC2.93□□□□□ -1.94
RETP07949 AC025588.3-201ENST00000604182 274 ntBASIC2.93□□□□□ -1.94
RETP07949 AC008962.1-201ENST00000605729 304 ntBASIC2.93□□□□□ -1.94
RETP07949 AP004247.3-201ENST00000608682 624 ntBASIC2.93□□□□□ -1.94
RETP07949 AC006213.4-201ENST00000616184 634 ntBASIC2.93□□□□□ -1.94
RETP07949 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
RETP07949 AL391262.2-201ENST00000622466 494 ntBASIC2.93□□□□□ -1.94
RETP07949 AP003476.1-201ENST00000623984 516 ntBASIC2.93□□□□□ -1.94
RETP07949 AC006963.1-201ENST00000624003 1052 ntBASIC2.93□□□□□ -1.94
RETP07949 AC098679.5-201ENST00000624394 571 ntBASIC2.93□□□□□ -1.94
RETP07949 AC243829.7-201ENST00000633081 225 ntBASIC2.93□□□□□ -1.94
RETP07949 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.93□□□□□ -1.94
RETP07949 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
RETP07949 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RETP07949 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RETP07949 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
RETP07949 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RETP07949 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RETP07949 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.92□□□□□ -1.94
RETP07949 RNU6-207P-201ENST00000384137 107 ntBASIC2.92□□□□□ -1.94
RETP07949 RNU6-932P-201ENST00000391108 106 ntBASIC2.92□□□□□ -1.94
RETP07949 AL360182.1-201ENST00000397433 468 ntBASIC2.92□□□□□ -1.94
RETP07949 AC110754.1-201ENST00000399740 601 ntBASIC2.92□□□□□ -1.94
RETP07949 AL355615.1-201ENST00000406187 641 ntBASIC2.92□□□□□ -1.94
RETP07949 AC092638.1-201ENST00000411966 1275 ntBASIC2.92□□□□□ -1.94
RETP07949 OR51A3P-201ENST00000413596 924 ntBASIC2.92□□□□□ -1.94
RETP07949 UBE2V1P9-201ENST00000414760 368 ntBASIC2.92□□□□□ -1.94
RETP07949 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.92□□□□□ -1.94
RETP07949 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.92□□□□□ -1.94
RETP07949 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.92□□□□□ -1.94
RETP07949 HSFY7P-201ENST00000432672 318 ntBASIC2.92□□□□□ -1.94
RETP07949 HSFY8P-201ENST00000437934 318 ntBASIC2.92□□□□□ -1.94
RETP07949 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.92□□□□□ -1.94
RETP07949 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.92□□□□□ -1.94
RETP07949 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.92□□□□□ -1.94
RETP07949 RPS24P6-201ENST00000452670 400 ntBASIC2.92□□□□□ -1.94
RETP07949 HSFY5P-201ENST00000453726 309 ntBASIC2.92□□□□□ -1.94
RETP07949 HMGB1P15-201ENST00000453854 435 ntBASIC2.92□□□□□ -1.94
RETP07949 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.92□□□□□ -1.94
RETP07949 AC128713.1-201ENST00000471495 306 ntBASIC2.92□□□□□ -1.94
RETP07949 SYPL1P1-201ENST00000473622 768 ntBASIC2.92□□□□□ -1.94
RETP07949 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.92□□□□□ -1.94
RETP07949 HMGB1P22-201ENST00000505315 124 ntBASIC2.92□□□□□ -1.94
RETP07949 AC104057.1-201ENST00000515547 497 ntBASIC2.92□□□□□ -1.94
RETP07949 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.92□□□□□ -1.94
RETP07949 AP003066.2-201ENST00000529375 555 ntBASIC2.92□□□□□ -1.94
RETP07949 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.92□□□□□ -1.94
RETP07949 AC087894.1-201ENST00000538359 518 ntBASIC2.92□□□□□ -1.94
RETP07949 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.92□□□□□ -1.94
RETP07949 AC092470.1-201ENST00000546187 132 ntBASIC2.92□□□□□ -1.94
RETP07949 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.92□□□□□ -1.94
RETP07949 BPTFP1-201ENST00000579209 492 ntBASIC2.92□□□□□ -1.94
RETP07949 AC024153.1-201ENST00000603103 365 ntBASIC2.92□□□□□ -1.94
RETP07949 AC009220.3-201ENST00000604318 586 ntBASIC2.92□□□□□ -1.94
RETP07949 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.92□□□□□ -1.94
RETP07949 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.92□□□□□ -1.94
RETP07949 BX649567.1-201ENST00000642071 1134 ntBASIC2.92□□□□□ -1.94
RETP07949 MTND4P9-201ENST00000507819 1346 ntBASIC2.92□□□□□ -1.94
RETP07949 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RETP07949 U3.12-201ENST00000364498 214 ntBASIC2.91□□□□□ -1.94
RETP07949 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RETP07949 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
RETP07949 RNU6-1257P-201ENST00000384625 110 ntBASIC2.91□□□□□ -1.94
RETP07949 RNU2-52P-201ENST00000410680 190 ntBASIC2.91□□□□□ -1.94
RETP07949 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.91□□□□□ -1.94
RETP07949 TOMM20P4-201ENST00000427861 435 ntBASIC2.91□□□□□ -1.94
RETP07949 RPS7P2-201ENST00000435134 607 ntBASIC2.91□□□□□ -1.94
RETP07949 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.91□□□□□ -1.94
RETP07949 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.91□□□□□ -1.94
RETP07949 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.91□□□□□ -1.94
RETP07949 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.91□□□□□ -1.94
RETP07949 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.91□□□□□ -1.94
RETP07949 RPS29P12-201ENST00000460178 152 ntBASIC2.91□□□□□ -1.94
RETP07949 AP004217.1-201ENST00000480579 346 ntBASIC2.91□□□□□ -1.94
RETP07949 RN7SL633P-201ENST00000488974 297 ntBASIC2.91□□□□□ -1.94
RETP07949 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
RETP07949 MTCO3P44-201ENST00000510977 541 ntBASIC2.91□□□□□ -1.94
RETP07949 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.91□□□□□ -1.94
RETP07949 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.91□□□□□ -1.94
RETP07949 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.91□□□□□ -1.94
RETP07949 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.91□□□□□ -1.94
RETP07949 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms