Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RN7SL652P-201ENST00000577769 300 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 AL162431.4-201ENST00000604674 411 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDGFAP04085 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFAP04085 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFAP04085 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFAP04085 AC093591.2-201ENST00000565254 3843 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFAP04085 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFAP04085 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFAP04085 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
PDGFAP04085 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 AC005005.4-201ENST00000623789 16698 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 AC007938.2-201ENST00000604666 2634 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PDGFAP04085 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDGFAP04085 RNU6-238P-201ENST00000363313 106 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 RNU6-1059P-201ENST00000363752 98 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PDGFAP04085 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDGFAP04085 RN7SKP125-201ENST00000410481 302 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 RNU2-23P-201ENST00000410545 195 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 AC096664.2-201ENST00000411843 406 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFAP04085 AC243428.1-201ENST00000421099 264 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFAP04085 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFAP04085 CYCSP6-201ENST00000434498 302 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 AL589765.3-201ENST00000446084 462 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFAP04085 RNU7-187P-201ENST00000458985 68 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.24□□□□□ -1.57
PDGFAP04085 RN7SL591P-201ENST00000496150 292 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 AC009901.1-201ENST00000506703 541 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.24□□□□□ -1.57
PDGFAP04085 RNU6-120P-201ENST00000516077 103 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 RNU6-914P-201ENST00000516749 109 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 SNORA31.22-201ENST00000517204 135 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFAP04085 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.24□□□□□ -1.57
PDGFAP04085 ELOCP5-201ENST00000604924 333 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 AL442067.1-201ENST00000613261 223 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 AC132068.1-201ENST00000623805 459 ntBASIC5.24□□□□□ -1.57
PDGFAP04085 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFAP04085 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFAP04085 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
PDGFAP04085 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
PDGFAP04085 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDGFAP04085 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFAP04085 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFAP04085 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFAP04085 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.23□□□□□ -1.57
PDGFAP04085 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFAP04085 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PDGFAP04085 U8.4-201ENST00000363626 134 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDGFAP04085 AC119751.6-201ENST00000416712 186 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 EI24P4-201ENST00000423683 1078 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 HSFY6P-201ENST00000445573 403 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 AC009963.2-201ENST00000453431 138 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 RN7SL51P-201ENST00000468230 285 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFAP04085 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFAP04085 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFAP04085 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.23□□□□□ -1.57
PDGFAP04085 MIR2117-201ENST00000516780 80 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFAP04085 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFAP04085 RN7SL708P-201ENST00000580952 299 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 SNORD84-203ENST00000584275 78 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFAP04085 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFAP04085 NUTF2P8-201ENST00000604593 363 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 NANOGP3-201ENST00000605855 286 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 RNU6-85P-201ENST00000605989 107 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 AL031601.2-202ENST00000622650 282 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.23□□□□□ -1.57
PDGFAP04085 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFAP04085 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFAP04085 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFAP04085 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFAP04085 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDGFAP04085 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFAP04085 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFAP04085 AC026523.2-201ENST00000625039 7739 ntBASIC5.23□□□□□ -1.57
PDGFAP04085 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PDGFAP04085 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFAP04085 AL591135.1-201ENST00000401578 5914 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms