Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 HIGD1AP3-201ENST00000515857 278 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.28□□□□□ -1.88
CLDN1O95832 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN1O95832 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN1O95832 AC103843.2-201ENST00000530523 682 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN1O95832 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 AC023161.2-201ENST00000551218 780 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 AC091489.2-201ENST00000566263 604 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC010653.1-201ENST00000571108 881 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 LARP7P3-201ENST00000579888 337 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC103987.3-201ENST00000582071 292 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN1O95832 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 AC073544.2-201ENST00000601155 540 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 BCRP9-201ENST00000605312 388 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC090186.1-201ENST00000605991 572 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC107214.2-201ENST00000608204 634 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC105429.2-201ENST00000610567 517 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC009509.4-201ENST00000619202 509 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CLDN1O95832 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN1O95832 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN1O95832 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN1O95832 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN1O95832 AC007823.1-201ENST00000569932 1566 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
CLDN1O95832 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN1O95832 AC066616.2-201ENST00000559334 1481 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AL022578.1-201ENST00000439330 1433 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.27□□□□□ -1.89
CLDN1O95832 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN1O95832 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN1O95832 MTND4P16-201ENST00000466108 1367 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AL353743.1-202ENST00000431724 1695 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 UBE3AP2-201ENST00000429033 2259 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN1O95832 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN1O95832 PABPC1P9-201ENST00000426076 1612 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AC097714.1-201ENST00000511272 1647 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CLDN1O95832 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN1O95832 SNORD9-201ENST00000362566 104 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 U3.4-201ENST00000363352 213 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 Y_RNA.194-201ENST00000363985 102 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 Y_RNA.553-201ENST00000384670 102 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 MIR153-1-201ENST00000384914 90 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 MIR199A2-201ENST00000385289 110 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 SOD2P1-201ENST00000396543 562 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN1O95832 RPS7P13-201ENST00000413955 498 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.27□□□□□ -1.89
CLDN1O95832 FNDC3CP-201ENST00000420795 1155 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 RPS27AP14-201ENST00000422868 454 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AL035410.1-201ENST00000427409 427 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AC005019.1-201ENST00000436455 431 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AC127537.2-201ENST00000439258 465 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 HMGB1P37-201ENST00000439613 609 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AL592447.1-201ENST00000447592 540 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.27□□□□□ -1.89
CLDN1O95832 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN1O95832 SUMO2P2-201ENST00000456482 255 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 BTF3P5-201ENST00000457252 467 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AC021678.1-201ENST00000505195 936 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 MTND4P2-201ENST00000507767 1203 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 OR5AP1P-201ENST00000529730 940 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN1O95832 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN1O95832 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.27□□□□□ -1.89
CLDN1O95832 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN1O95832 OR4G1P-201ENST00000588632 938 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN1O95832 AC146944.4-201ENST00000602697 718 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 YWHAQP7-201ENST00000603536 658 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AC006077.1-201ENST00000604746 343 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 RN7SKP299-201ENST00000606679 301 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AC090116.1-201ENST00000615679 446 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 MIR7112-201ENST00000616126 65 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AC009878.1-201ENST00000621819 340 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AC006386.2-201ENST00000624491 75 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AC012005.1-201ENST00000624575 75 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN1O95832 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN1O95832 MIR4496-201ENST00000635896 61 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN1O95832 NUP58P1-201ENST00000502546 1738 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN1O95832 AC006378.2-201ENST00000623178 2476 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 AL356473.1-201ENST00000406203 1408 ntBASIC3.27□□□□□ -1.89
CLDN1O95832 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.26□□□□□ -1.89
CLDN1O95832 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN1O95832 AC090337.1-201ENST00000579651 2074 ntBASIC3.26□□□□□ -1.89
CLDN1O95832 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN1O95832 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms