Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC008121.2-201ENST00000614647 523 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AL607023.1-201ENST00000620045 248 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AC002550.2-201ENST00000621246 394 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AL159972.1-201ENST00000625150 448 ntBASIC3.42□□□□□ -1.86
SIX3O95343 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.42□□□□□ -1.86
SIX3O95343 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX3O95343 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX3O95343 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX3O95343 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX3O95343 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
SIX3O95343 CUL1P1-201ENST00000509510 2425 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AP001486.2-201ENST00000561652 5113 ntBASIC3.42□□□□□ -1.86
SIX3O95343 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX3O95343 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX3O95343 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SIX3O95343 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX3O95343 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX3O95343 RNU6-343P-201ENST00000364709 104 ntBASIC3.41□□□□□ -1.86
SIX3O95343 RNU6-744P-201ENST00000365557 107 ntBASIC3.41□□□□□ -1.86
SIX3O95343 RNU6-1316P-201ENST00000384242 108 ntBASIC3.41□□□□□ -1.86
SIX3O95343 ATP5A1P2-201ENST00000412323 255 ntBASIC3.41□□□□□ -1.86
SIX3O95343 HIGD1AP15-201ENST00000416198 280 ntBASIC3.41□□□□□ -1.86
SIX3O95343 AL035423.1-201ENST00000420331 213 ntBASIC3.41□□□□□ -1.86
SIX3O95343 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX3O95343 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX3O95343 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX3O95343 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX3O95343 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX3O95343 AC112653.1-201ENST00000443851 386 ntBASIC3.41□□□□□ -1.86
SIX3O95343 AL591719.1-201ENST00000444669 744 ntBASIC3.41□□□□□ -1.86
SIX3O95343 Z73417.1-201ENST00000447373 778 ntBASIC3.41□□□□□ -1.86
SIX3O95343 RPS3AP46-201ENST00000448352 682 ntBASIC3.41□□□□□ -1.86
SIX3O95343 PDSS1P2-201ENST00000449397 678 ntBASIC3.41□□□□□ -1.86
SIX3O95343 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX3O95343 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX3O95343 AC034159.1-201ENST00000513885 583 ntBASIC3.41□□□□□ -1.86
SIX3O95343 MIR2276-201ENST00000516886 89 ntBASIC3.41□□□□□ -1.86
SIX3O95343 RNU6-840P-201ENST00000517275 65 ntBASIC3.41□□□□□ -1.86
SIX3O95343 AC105185.1-201ENST00000518705 535 ntBASIC3.41□□□□□ -1.86
SIX3O95343 RPL12P22-201ENST00000519073 490 ntBASIC3.41□□□□□ -1.86
SIX3O95343 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX3O95343 PDCL2P2-201ENST00000533651 189 ntBASIC3.41□□□□□ -1.86
SIX3O95343 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX3O95343 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX3O95343 AC011602.1-201ENST00000546484 331 ntBASIC3.41□□□□□ -1.86
SIX3O95343 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX3O95343 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX3O95343 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX3O95343 MIR4474-201ENST00000579189 78 ntBASIC3.41□□□□□ -1.86
SIX3O95343 AL353997.4-201ENST00000586196 166 ntBASIC3.41□□□□□ -1.86
SIX3O95343 AC067852.3-201ENST00000589177 561 ntBASIC3.41□□□□□ -1.86
SIX3O95343 AC025588.2-201ENST00000604851 466 ntBASIC3.41□□□□□ -1.86
SIX3O95343 BNIP3P10-201ENST00000605360 577 ntBASIC3.41□□□□□ -1.86
SIX3O95343 AP000240.1-201ENST00000609910 452 ntBASIC3.41□□□□□ -1.86
SIX3O95343 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX3O95343 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX3O95343 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX3O95343 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX3O95343 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX3O95343 AC011477.1-204ENST00000623416 1325 ntBASIC3.41□□□□□ -1.86
SIX3O95343 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX3O95343 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.4□□□□□ -1.86
SIX3O95343 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.4□□□□□ -1.86
SIX3O95343 AL513302.2-201ENST00000562313 1842 ntBASIC3.4□□□□□ -1.86
SIX3O95343 AC009812.4-201ENST00000569134 1805 ntBASIC3.4□□□□□ -1.86
SIX3O95343 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.4□□□□□ -1.86
SIX3O95343 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SIX3O95343 ZNF807-201ENST00000328088 1707 ntBASIC3.4□□□□□ -1.87
SIX3O95343 RNU6-462P-201ENST00000362659 105 ntBASIC3.4□□□□□ -1.87
SIX3O95343 RNU6-853P-201ENST00000364306 107 ntBASIC3.4□□□□□ -1.87
SIX3O95343 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SIX3O95343 AL590704.1-201ENST00000402856 794 ntBASIC3.4□□□□□ -1.87
SIX3O95343 MIR1290-201ENST00000408735 78 ntBASIC3.4□□□□□ -1.87
SIX3O95343 MIR1289-1-201ENST00000408836 144 ntBASIC3.4□□□□□ -1.87
SIX3O95343 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX3O95343 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.4□□□□□ -1.87
SIX3O95343 HMGB3P23-201ENST00000414981 585 ntBASIC3.4□□□□□ -1.87
SIX3O95343 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX3O95343 UBE2D3P2-201ENST00000424409 445 ntBASIC3.4□□□□□ -1.87
SIX3O95343 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.4□□□□□ -1.87
SIX3O95343 AL354941.1-201ENST00000438600 464 ntBASIC3.4□□□□□ -1.87
SIX3O95343 AL136097.1-201ENST00000456945 913 ntBASIC3.4□□□□□ -1.87
SIX3O95343 AP001486.1-201ENST00000463339 476 ntBASIC3.4□□□□□ -1.87
SIX3O95343 AC023598.1-201ENST00000472521 361 ntBASIC3.4□□□□□ -1.87
SIX3O95343 AL049830.2-201ENST00000480072 201 ntBASIC3.4□□□□□ -1.87
SIX3O95343 AC021382.1-201ENST00000483523 359 ntBASIC3.4□□□□□ -1.87
SIX3O95343 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SIX3O95343 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX3O95343 AC074250.1-201ENST00000511117 192 ntBASIC3.4□□□□□ -1.87
SIX3O95343 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.4□□□□□ -1.87
SIX3O95343 RN7SKP60-201ENST00000516985 239 ntBASIC3.4□□□□□ -1.87
SIX3O95343 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX3O95343 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX3O95343 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX3O95343 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.4□□□□□ -1.87
SIX3O95343 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.4□□□□□ -1.87
SIX3O95343 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX3O95343 MTND1P24-201ENST00000552175 861 ntBASIC3.4□□□□□ -1.87
SIX3O95343 GTF2IP22-201ENST00000554443 182 ntBASIC3.4□□□□□ -1.87
SIX3O95343 AC034268.2-201ENST00000571784 482 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms