Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB2O43679 RNU6-853P-201ENST00000364306 107 ntBASIC3.78□□□□□ -1.8
LDB2O43679 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LDB2O43679 MIR670-201ENST00000390142 98 ntBASIC3.78□□□□□ -1.8
LDB2O43679 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LDB2O43679 RPS20P2-201ENST00000402520 389 ntBASIC3.78□□□□□ -1.8
LDB2O43679 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.78□□□□□ -1.8
LDB2O43679 RNA5SP239-201ENST00000410218 129 ntBASIC3.78□□□□□ -1.8
LDB2O43679 AC004987.3-201ENST00000413879 771 ntBASIC3.78□□□□□ -1.8
LDB2O43679 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB2O43679 RAC1P3-201ENST00000416129 580 ntBASIC3.78□□□□□ -1.8
LDB2O43679 C1DP2-201ENST00000418167 426 ntBASIC3.78□□□□□ -1.8
LDB2O43679 RPS12P23-201ENST00000419579 400 ntBASIC3.78□□□□□ -1.8
LDB2O43679 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 RPL21P109-201ENST00000422213 475 ntBASIC3.78□□□□□ -1.8
LDB2O43679 AC007742.1-201ENST00000425789 329 ntBASIC3.78□□□□□ -1.8
LDB2O43679 MTND3P21-201ENST00000433774 331 ntBASIC3.78□□□□□ -1.8
LDB2O43679 AC007389.2-201ENST00000434630 306 ntBASIC3.78□□□□□ -1.8
LDB2O43679 ELOCP26-201ENST00000436067 329 ntBASIC3.78□□□□□ -1.8
LDB2O43679 RPL22P17-201ENST00000438729 315 ntBASIC3.78□□□□□ -1.8
LDB2O43679 AC127537.2-201ENST00000439258 465 ntBASIC3.78□□□□□ -1.8
LDB2O43679 FAM103A2P-201ENST00000444122 354 ntBASIC3.78□□□□□ -1.8
LDB2O43679 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.78□□□□□ -1.8
LDB2O43679 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 AC093392.2-201ENST00000450682 337 ntBASIC3.78□□□□□ -1.8
LDB2O43679 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB2O43679 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 RN7SL93P-201ENST00000463035 293 ntBASIC3.78□□□□□ -1.8
LDB2O43679 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.78□□□□□ -1.8
LDB2O43679 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 SNORA67.7-201ENST00000516664 135 ntBASIC3.78□□□□□ -1.8
LDB2O43679 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB2O43679 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB2O43679 MIR3913-1-201ENST00000577744 102 ntBASIC3.78□□□□□ -1.8
LDB2O43679 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LDB2O43679 MIR3158-1-201ENST00000583596 81 ntBASIC3.78□□□□□ -1.8
LDB2O43679 OR4G1P-201ENST00000588632 938 ntBASIC3.78□□□□□ -1.8
LDB2O43679 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.78□□□□□ -1.8
LDB2O43679 AC025946.2-201ENST00000603398 234 ntBASIC3.78□□□□□ -1.8
LDB2O43679 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LDB2O43679 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.78□□□□□ -1.8
LDB2O43679 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB2O43679 OR5AK4P-201ENST00000635912 903 ntBASIC3.78□□□□□ -1.8
LDB2O43679 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB2O43679 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LDB2O43679 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
LDB2O43679 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB2O43679 AC093536.2-201ENST00000565257 1406 ntBASIC3.78□□□□□ -1.8
LDB2O43679 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB2O43679 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB2O43679 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB2O43679 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LDB2O43679 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LDB2O43679 FARSBP1-201ENST00000435808 1778 ntBASIC3.77□□□□□ -1.81
LDB2O43679 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB2O43679 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LDB2O43679 RN7SKP226-201ENST00000364912 300 ntBASIC3.77□□□□□ -1.81
LDB2O43679 MIR30B-201ENST00000384850 88 ntBASIC3.77□□□□□ -1.81
LDB2O43679 PTMAP2-201ENST00000397627 327 ntBASIC3.77□□□□□ -1.81
LDB2O43679 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB2O43679 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB2O43679 RABEPKP1-201ENST00000440529 1026 ntBASIC3.77□□□□□ -1.81
LDB2O43679 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB2O43679 AC006480.1-201ENST00000449887 378 ntBASIC3.77□□□□□ -1.81
LDB2O43679 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB2O43679 AC099563.1-201ENST00000456086 418 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB2O43679 AP001992.1-205ENST00000462248 379 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AP000926.1-201ENST00000479573 241 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB2O43679 AP002812.1-201ENST00000495378 474 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AL139099.1-201ENST00000497398 403 ntBASIC3.77□□□□□ -1.81
LDB2O43679 OR5H5P-201ENST00000503164 928 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AC109927.2-201ENST00000506416 303 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB2O43679 AC091133.4-201ENST00000511142 308 ntBASIC3.77□□□□□ -1.81
LDB2O43679 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB2O43679 RNU6-506P-201ENST00000516553 94 ntBASIC3.77□□□□□ -1.81
LDB2O43679 RN7SKP209-201ENST00000516888 304 ntBASIC3.77□□□□□ -1.81
LDB2O43679 RNU6-714P-201ENST00000516963 103 ntBASIC3.77□□□□□ -1.81
LDB2O43679 RNU6-430P-201ENST00000517078 107 ntBASIC3.77□□□□□ -1.81
LDB2O43679 MTCO2P4-201ENST00000517968 247 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB2O43679 DEFB108A-201ENST00000530110 222 ntBASIC3.77□□□□□ -1.81
LDB2O43679 PTP4A1P6-201ENST00000531034 478 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AC024224.1-201ENST00000538284 609 ntBASIC3.77□□□□□ -1.81
LDB2O43679 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB2O43679 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB2O43679 AC107016.1-201ENST00000550463 337 ntBASIC3.77□□□□□ -1.81
LDB2O43679 EEF1B2P4-201ENST00000551398 348 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms