Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF223E7ERA6 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF223E7ERA6 AC005332.9-201ENST00000620266 2921 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF223E7ERA6 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF223E7ERA6 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF223E7ERA6 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF223E7ERA6 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF223E7ERA6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 snoU2_19.4-201ENST00000364329 80 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 MIR130B-202ENST00000385018 82 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 MIR1204-201ENST00000408388 67 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 RN7SKP271-201ENST00000410528 320 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 AC124916.1-201ENST00000444020 547 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 NXT1P1-201ENST00000458481 316 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 Y_RNA.651-201ENST00000459380 103 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 RPS4XP1-201ENST00000482189 787 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 AC106785.4-201ENST00000569492 412 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 MIR4675-201ENST00000577898 77 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 MIR4701-201ENST00000583094 63 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 AL161798.1-201ENST00000604630 131 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 AL034408.1-202ENST00000636088 415 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF223E7ERA6 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF223E7ERA6 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF223E7ERA6 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF223E7ERA6 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 MAPK10-383ENST00000642032 3390 ntBASIC5.35□□□□□ -1.55
RNF223E7ERA6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF223E7ERA6 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF223E7ERA6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF223E7ERA6 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF223E7ERA6 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF223E7ERA6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF223E7ERA6 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF223E7ERA6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF223E7ERA6 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF223E7ERA6 MIR323A-201ENST00000362199 86 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 SNORA36C-201ENST00000384289 132 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 SNORA26.2-201ENST00000390922 122 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 SNORA40.5-201ENST00000391061 128 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 AC079355.1-201ENST00000421770 223 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 GSTM5P1-201ENST00000434751 660 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 RPL12P18-201ENST00000437175 325 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 RPL23AP24-201ENST00000458203 385 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 ACA64.1-201ENST00000459171 127 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 RN7SL189P-201ENST00000468631 289 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 SNORD46.2-201ENST00000516021 102 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 snoU109.6-201ENST00000516831 118 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 RN7SKP277-201ENST00000516895 283 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 RNU6-537P-201ENST00000517277 103 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 AP000620.1-201ENST00000527147 504 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 AL358913.1-201ENST00000554342 121 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 RN7SL475P-201ENST00000583379 298 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 AC123786.2-201ENST00000603459 275 ntBASIC5.34□□□□□ -1.55
RNF223E7ERA6 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF223E7ERA6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.34□□□□□ -1.56
RNF223E7ERA6 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RNF223E7ERA6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RNF223E7ERA6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.34□□□□□ -1.56
RNF223E7ERA6 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RNF223E7ERA6 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RNF223E7ERA6 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RNF223E7ERA6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF223E7ERA6 AC008555.8-201ENST00000623602 2168 ntBASIC5.33□□□□□ -1.56
RNF223E7ERA6 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF223E7ERA6 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF223E7ERA6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF223E7ERA6 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF223E7ERA6 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF223E7ERA6 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF223E7ERA6 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
RNF223E7ERA6 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF223E7ERA6 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms