Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ATP5F1P1-201ENST00000433775 569 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 RPL7P52-201ENST00000449200 742 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 RFC5P1-201ENST00000454419 874 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 BX510359.1-201ENST00000456973 237 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 RPL27AP5-201ENST00000469428 449 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AC006445.1-201ENST00000491925 405 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 RN7SL504P-201ENST00000494496 287 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 MTCYBP17-201ENST00000503579 789 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 SNORA9.3-201ENST00000516383 129 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AC009812.2-201ENST00000517657 457 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AC087808.1-201ENST00000520501 361 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 HPRT1P3-201ENST00000539521 576 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AL132657.2-201ENST00000564417 358 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 MIR5004-201ENST00000579078 107 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 CLIC4P2-201ENST00000601934 717 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 DUXAP3-201ENST00000603616 594 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AC092954.1-201ENST00000609121 445 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AC231759.1-201ENST00000616455 597 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.84□□□□□ -1.96
TRIM49D1C9J1S8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
TRIM49D1C9J1S8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
TRIM49D1C9J1S8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.84□□□□□ -1.96
TRIM49D1C9J1S8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
TRIM49D1C9J1S8 Z99496.1-201ENST00000469424 1477 ntBASIC2.84□□□□□ -1.96
TRIM49D1C9J1S8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC002546.1-201ENST00000588041 2504 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 RNU6-444P-201ENST00000383988 108 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 RNU2-71P-201ENST00000411395 189 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 RPS24P7-201ENST00000416921 246 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC008280.1-201ENST00000418851 412 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC010099.3-201ENST00000423896 409 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 DPPA2P1-201ENST00000428060 556 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 RPL23AP83-201ENST00000434984 473 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC084290.1-201ENST00000434995 374 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 RPS3AP12-201ENST00000443616 753 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 COX6CP2-201ENST00000444980 225 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 RPL21P134-201ENST00000453468 483 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 RPL5P24-201ENST00000463742 885 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC116353.3-201ENST00000511215 249 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 RNU6-1225P-201ENST00000516336 65 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AP001317.1-201ENST00000531194 960 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AL163153.1-201ENST00000554223 283 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC009094.1-201ENST00000564443 426 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 MIR4504-201ENST00000577413 92 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 MIR3605-201ENST00000583214 100 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 MIR5195-201ENST00000583555 115 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC008751.2-201ENST00000597885 980 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 BNIP3P11-201ENST00000603878 563 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 IGHV3-29-201ENST00000604817 344 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AL158042.1-201ENST00000605338 460 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC091946.2-201ENST00000606105 291 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AL359535.1-201ENST00000612100 1087 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 CU459211.1-201ENST00000635667 749 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AC090897.3-201ENST00000636973 1157 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AP000526.1-201ENST00000603308 1388 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 AP003122.5-201ENST00000527668 3766 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms