Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC034268.2-201ENST00000571784 482 ntBASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC010620.1-201ENST00000601088 1102 ntBASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL031176.1-201ENST00000604554 466 ntBASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC083809.1-201ENST00000615051 472 ntBASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 PABPC1P9-201ENST00000426076 1612 ntBASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AP001350.1-201ENST00000601906 1524 ntBASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC116096.1-201ENST00000566804 2314 ntBASIC3.18□□□□□ -1.9
TRBV4-1A0A0J9YWV2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RNU4-21P-201ENST00000362802 126 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RNU6-853P-201ENST00000364306 107 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MIR135A2-201ENST00000384854 100 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MT-TH-201ENST00000387441 69 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MIR1302-8-201ENST00000408342 128 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 NPM1P11-201ENST00000417106 855 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 BEND7P1-201ENST00000422058 457 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPL37P21-201ENST00000435890 276 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 TXNP1-201ENST00000441872 371 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 FAM103A2P-201ENST00000444122 354 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPL7P36-201ENST00000444633 681 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 BMI1P1-201ENST00000445879 941 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPL36AP33-201ENST00000450395 310 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SNRPGP3-201ENST00000469405 227 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL049830.2-201ENST00000480072 201 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 UBE2CP3-201ENST00000502715 450 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 DSTNP2-201ENST00000504533 515 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MIR4286-201ENST00000580651 93 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 UBE2L4-201ENST00000587688 464 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC006254.3-201ENST00000603353 884 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL590282.1-201ENST00000610379 1136 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC015967.1-201ENST00000619893 476 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL158801.5-201ENST00000623123 465 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 U6.98-201ENST00000637157 84 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 CCT4P2-201ENST00000233836 1548 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC032011.1-201ENST00000611703 1549 ntBASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRBV4-1A0A0J9YWV2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC007496.3-201ENST00000624987 3443 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RNU5F-6P-201ENST00000362979 116 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SNORD116-1-201ENST00000384335 95 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 U8.14-201ENST00000390843 143 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SNORA26.8-201ENST00000391306 124 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SKINT1L-201ENST00000401057 817 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC109780.2-201ENST00000413467 845 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL356968.1-201ENST00000416622 474 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC244035.1-201ENST00000430042 390 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 TRIM60P18-201ENST00000441518 828 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC118469.1-201ENST00000442943 488 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 GDI2P2-201ENST00000445131 608 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL136097.1-201ENST00000456945 913 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 HMGN1P18-201ENST00000457642 277 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPL7L1P8-201ENST00000469911 741 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPL7P23-201ENST00000493874 747 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms