Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 FITM1-202ENST00000559294 800 ntBASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 AC018445.3-201ENST00000624177 1945 ntBASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 KRT8P9-201ENST00000558927 1449 ntBASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 AC012306.2-201ENST00000609350 630 ntBASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 DGCR10-201ENST00000609839 495 ntBASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 AC097493.4-201ENST00000641197 219 ntBASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 AC087289.5-201ENST00000586076 3175 ntBASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 BX323043.1-201ENST00000641006 1765 ntBASIC21.41■■□□□ 1.02
COL4A3BPQ9Y5P4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
COL4A3BPQ9Y5P4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
COL4A3BPQ9Y5P4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
COL4A3BPQ9Y5P4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.39■■□□□ 1.02
COL4A3BPQ9Y5P4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL4A3BPQ9Y5P4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL4A3BPQ9Y5P4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 Z85996.1-201ENST00000494644 937 ntBASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 AL160286.2-201ENST00000567150 934 ntBASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 AC011298.2-201ENST00000617989 482 ntBASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 AC130371.2-201ENST00000619443 611 ntBASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 SDHAP1-207ENST00000440850 2000 ntBASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 LINC01465-201ENST00000408887 1940 ntBASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL4A3BPQ9Y5P4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 AIRN-201ENST00000601203 4374 ntBASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 AC004951.3-201ENST00000418645 1148 ntBASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.38■■□□□ 1.01
COL4A3BPQ9Y5P4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms