Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 AC125437.2-201ENST00000625180 2167 ntBASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00588Q9Y4M8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 TSPY21P-201ENST00000433481 731 ntBASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 TSPY23P-201ENST00000440136 739 ntBASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00588Q9Y4M8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 AC104076.2-201ENST00000448912 469 ntBASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 AP003041.3-201ENST00000527151 707 ntBASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00588Q9Y4M8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms