Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CISHQ9NSE2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CISHQ9NSE2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CISHQ9NSE2 IRX1P1-201ENST00000438849 1838 ntBASIC20.44■□□□□ 0.86
CISHQ9NSE2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CISHQ9NSE2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.44■□□□□ 0.86
CISHQ9NSE2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CISHQ9NSE2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CISHQ9NSE2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CISHQ9NSE2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.44■□□□□ 0.86
CISHQ9NSE2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CISHQ9NSE2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CISHQ9NSE2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.44■□□□□ 0.86
CISHQ9NSE2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.44■□□□□ 0.86
CISHQ9NSE2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.44■□□□□ 0.86
CISHQ9NSE2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CISHQ9NSE2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CISHQ9NSE2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CISHQ9NSE2 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.43■□□□□ 0.86
CISHQ9NSE2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CISHQ9NSE2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CISHQ9NSE2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CISHQ9NSE2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 AL596275.1-201ENST00000423464 877 ntBASIC20.43■□□□□ 0.86
CISHQ9NSE2 FAM207BP-201ENST00000447172 505 ntBASIC20.43■□□□□ 0.86
CISHQ9NSE2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 AL161938.1-201ENST00000569833 2180 ntBASIC20.43■□□□□ 0.86
CISHQ9NSE2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.43■□□□□ 0.86
CISHQ9NSE2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CISHQ9NSE2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.42■□□□□ 0.86
CISHQ9NSE2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CISHQ9NSE2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.42■□□□□ 0.86
CISHQ9NSE2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 AP000692.2-201ENST00000608391 879 ntBASIC20.42■□□□□ 0.86
CISHQ9NSE2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.42■□□□□ 0.86
CISHQ9NSE2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CISHQ9NSE2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CISHQ9NSE2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.42■□□□□ 0.86
CISHQ9NSE2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CISHQ9NSE2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CISHQ9NSE2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CISHQ9NSE2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.41■□□□□ 0.86
CISHQ9NSE2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CISHQ9NSE2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.41■□□□□ 0.86
CISHQ9NSE2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CISHQ9NSE2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.41■□□□□ 0.86
CISHQ9NSE2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.41■□□□□ 0.86
CISHQ9NSE2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.41■□□□□ 0.86
CISHQ9NSE2 DGCR10-201ENST00000609839 495 ntBASIC20.41■□□□□ 0.86
CISHQ9NSE2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CISHQ9NSE2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CISHQ9NSE2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CISHQ9NSE2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CISHQ9NSE2 FEM1AP3-201ENST00000403722 1741 ntBASIC20.41■□□□□ 0.86
CISHQ9NSE2 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.41■□□□□ 0.86
CISHQ9NSE2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CISHQ9NSE2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CISHQ9NSE2 FP475955.4-201ENST00000623131 1990 ntBASIC20.41■□□□□ 0.86
CISHQ9NSE2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.41■□□□□ 0.86
CISHQ9NSE2 AL049812.1-201ENST00000432563 2267 ntBASIC20.41■□□□□ 0.86
CISHQ9NSE2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CISHQ9NSE2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CISHQ9NSE2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 KRT17P2-201ENST00000300992 1314 ntBASIC20.4■□□□□ 0.86
CISHQ9NSE2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.4■□□□□ 0.86
CISHQ9NSE2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 PRSS44-201ENST00000515154 1146 ntBASIC20.4■□□□□ 0.86
CISHQ9NSE2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.4■□□□□ 0.86
CISHQ9NSE2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.4■□□□□ 0.86
CISHQ9NSE2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms