Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SDHAF3Q9NRP4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SDHAF3Q9NRP4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SDHAF3Q9NRP4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SDHAF3Q9NRP4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.58■□□□□ 0.41
SDHAF3Q9NRP4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SDHAF3Q9NRP4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.58■□□□□ 0.41
SDHAF3Q9NRP4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SDHAF3Q9NRP4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SDHAF3Q9NRP4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 MIR6786-201ENST00000616843 113 ntBASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SDHAF3Q9NRP4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 LINC01465-201ENST00000408887 1940 ntBASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 Z85996.1-201ENST00000494644 937 ntBASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 AC116562.2-201ENST00000507042 360 ntBASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 AC011298.2-201ENST00000617989 482 ntBASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 RCC2P6-201ENST00000526625 1557 ntBASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHAF3Q9NRP4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 Z82202.1-201ENST00000623446 1880 ntBASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 TSPY7P-201ENST00000431358 1114 ntBASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 TSPY21P-201ENST00000433481 731 ntBASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 AP003071.4-201ENST00000562276 1284 ntBASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SDHAF3Q9NRP4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SDHAF3Q9NRP4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHAF3Q9NRP4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SDHAF3Q9NRP4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SDHAF3Q9NRP4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SDHAF3Q9NRP4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHAF3Q9NRP4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.55■□□□□ 0.4
SDHAF3Q9NRP4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHAF3Q9NRP4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SDHAF3Q9NRP4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms