Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TLR9Q9NR96 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TLR9Q9NR96 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TLR9Q9NR96 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TLR9Q9NR96 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TLR9Q9NR96 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TLR9Q9NR96 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.31■□□□□ 0.84
TLR9Q9NR96 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.31■□□□□ 0.84
TLR9Q9NR96 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.31■□□□□ 0.84
TLR9Q9NR96 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.31■□□□□ 0.84
TLR9Q9NR96 CR769767.2-201ENST00000622735 460 ntBASIC20.31■□□□□ 0.84
TLR9Q9NR96 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TLR9Q9NR96 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TLR9Q9NR96 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.31■□□□□ 0.84
TLR9Q9NR96 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TLR9Q9NR96 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.31■□□□□ 0.84
TLR9Q9NR96 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TLR9Q9NR96 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.31■□□□□ 0.84
TLR9Q9NR96 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.3■□□□□ 0.84
TLR9Q9NR96 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR9Q9NR96 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TLR9Q9NR96 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR9Q9NR96 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TLR9Q9NR96 HBZP1-201ENST00000354915 429 ntBASIC20.3■□□□□ 0.84
TLR9Q9NR96 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.3■□□□□ 0.84
TLR9Q9NR96 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TLR9Q9NR96 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR9Q9NR96 AL645929.1-201ENST00000420084 975 ntBASIC20.3■□□□□ 0.84
TLR9Q9NR96 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.3■□□□□ 0.84
TLR9Q9NR96 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.3■□□□□ 0.84
TLR9Q9NR96 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TLR9Q9NR96 NPAP1P7-201ENST00000613027 823 ntBASIC20.3■□□□□ 0.84
TLR9Q9NR96 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TLR9Q9NR96 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
TLR9Q9NR96 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR9Q9NR96 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.29■□□□□ 0.84
TLR9Q9NR96 AL691432.2-201ENST00000607222 2038 ntBASIC20.29■□□□□ 0.84
TLR9Q9NR96 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.29■□□□□ 0.84
TLR9Q9NR96 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TLR9Q9NR96 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.29■□□□□ 0.84
TLR9Q9NR96 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.29■□□□□ 0.84
TLR9Q9NR96 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.29■□□□□ 0.84
TLR9Q9NR96 AC092119.3-201ENST00000612618 583 ntBASIC20.29■□□□□ 0.84
TLR9Q9NR96 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
TLR9Q9NR96 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TLR9Q9NR96 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TLR9Q9NR96 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.29■□□□□ 0.84
TLR9Q9NR96 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR9Q9NR96 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 AC034232.1-201ENST00000506026 1064 ntBASIC20.28■□□□□ 0.84
TLR9Q9NR96 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.28■□□□□ 0.84
TLR9Q9NR96 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR9Q9NR96 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR9Q9NR96 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TLR9Q9NR96 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
TLR9Q9NR96 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
TLR9Q9NR96 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TLR9Q9NR96 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR9Q9NR96 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TLR9Q9NR96 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TLR9Q9NR96 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR9Q9NR96 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR9Q9NR96 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms