Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.1■□□□□ 0.49
PRDM9Q9NQV7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PRDM9Q9NQV7 MESTP1-201ENST00000404287 994 ntBASIC18.1■□□□□ 0.49
PRDM9Q9NQV7 AC011506.1-201ENST00000474329 610 ntBASIC18.1■□□□□ 0.49
PRDM9Q9NQV7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRDM9Q9NQV7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.1■□□□□ 0.49
PRDM9Q9NQV7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRDM9Q9NQV7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PRDM9Q9NQV7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PRDM9Q9NQV7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PRDM9Q9NQV7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRDM9Q9NQV7 TEX21P-204ENST00000641479 1693 ntBASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 UNC93B2-201ENST00000285383 730 ntBASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 AC011298.2-201ENST00000617989 482 ntBASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 AC130371.2-201ENST00000619443 611 ntBASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.09■□□□□ 0.49
PRDM9Q9NQV7 KRT8P41-201ENST00000533985 1514 ntBASIC18.08■□□□□ 0.49
PRDM9Q9NQV7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PRDM9Q9NQV7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRDM9Q9NQV7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRDM9Q9NQV7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRDM9Q9NQV7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRDM9Q9NQV7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.08■□□□□ 0.49
PRDM9Q9NQV7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 RBM17P1-201ENST00000453646 1190 ntBASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 DGCR10-201ENST00000609839 495 ntBASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRDM9Q9NQV7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 AIRN-201ENST00000601203 4374 ntBASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.07■□□□□ 0.48
PRDM9Q9NQV7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.06■□□□□ 0.48
PRDM9Q9NQV7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.06■□□□□ 0.48
PRDM9Q9NQV7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRDM9Q9NQV7 FP475955.4-201ENST00000623131 1990 ntBASIC18.06■□□□□ 0.48
PRDM9Q9NQV7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms