Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.04■□□□□ 0.8
CSNK1G1Q9HCP0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 HMGA1P5-201ENST00000412453 271 ntBASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 FAM210CP-201ENST00000445714 574 ntBASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CSNK1G1Q9HCP0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 IRX1P1-201ENST00000438849 1838 ntBASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 TERF1P1-201ENST00000311003 1181 ntBASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 AP003041.3-201ENST00000527151 707 ntBASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G1Q9HCP0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CSNK1G1Q9HCP0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.02■□□□□ 0.79
CSNK1G1Q9HCP0 AC005332.7-201ENST00000614046 2005 ntBASIC20.02■□□□□ 0.79
CSNK1G1Q9HCP0 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.02■□□□□ 0.79
CSNK1G1Q9HCP0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
CSNK1G1Q9HCP0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CSNK1G1Q9HCP0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 AC005521.1-201ENST00000393351 872 ntBASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 KRT8P3-201ENST00000519669 1449 ntBASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 FP475955.4-201ENST00000623131 1990 ntBASIC20.01■□□□□ 0.79
CSNK1G1Q9HCP0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 AC010203.1-204ENST00000548782 407 ntBASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 AC092865.7-201ENST00000641832 219 ntBASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20■□□□□ 0.79
CSNK1G1Q9HCP0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms