Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 FAM197Y3-203ENST00000618346 717 ntBASIC17.85■□□□□ 0.45
CHD8Q9HCK8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.85■□□□□ 0.45
CHD8Q9HCK8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD8Q9HCK8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 AC091607.1-201ENST00000490318 1060 ntBASIC17.84■□□□□ 0.45
CHD8Q9HCK8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 AC079602.3-201ENST00000623931 403 ntBASIC17.84■□□□□ 0.45
CHD8Q9HCK8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.84■□□□□ 0.45
CHD8Q9HCK8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CHD8Q9HCK8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHD8Q9HCK8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHD8Q9HCK8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.83■□□□□ 0.45
CHD8Q9HCK8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHD8Q9HCK8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
CHD8Q9HCK8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 AC112482.1-201ENST00000492080 688 ntBASIC17.83■□□□□ 0.44
CHD8Q9HCK8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 BNIP3P18-201ENST00000593976 575 ntBASIC17.83■□□□□ 0.44
CHD8Q9HCK8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 GPAT2P1-201ENST00000444924 1672 ntBASIC17.83■□□□□ 0.44
CHD8Q9HCK8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.83■□□□□ 0.44
CHD8Q9HCK8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 TMEM179-206ENST00000616017 1645 ntBASIC17.82■□□□□ 0.44
CHD8Q9HCK8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 AC245100.3-201ENST00000441281 285 ntBASIC17.82■□□□□ 0.44
CHD8Q9HCK8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 AC106028.4-201ENST00000614509 607 ntBASIC17.82■□□□□ 0.44
CHD8Q9HCK8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 AC034105.1-201ENST00000563488 319 ntBASIC17.82■□□□□ 0.44
CHD8Q9HCK8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.82■□□□□ 0.44
CHD8Q9HCK8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHD8Q9HCK8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms