Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 FP475955.4-201ENST00000623131 1990 ntBASIC19.78■□□□□ 0.76
PCDH9Q9HC56 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 AC124016.1-201ENST00000609552 612 ntBASIC19.78■□□□□ 0.76
PCDH9Q9HC56 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 IRX1P1-201ENST00000438849 1838 ntBASIC19.78■□□□□ 0.76
PCDH9Q9HC56 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH9Q9HC56 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 AC093525.10-201ENST00000625130 1569 ntBASIC19.77■□□□□ 0.76
PCDH9Q9HC56 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH9Q9HC56 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PCDH9Q9HC56 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDH9Q9HC56 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.77■□□□□ 0.75
PCDH9Q9HC56 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.77■□□□□ 0.75
PCDH9Q9HC56 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
PCDH9Q9HC56 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 NEFHP1-201ENST00000412845 2629 ntBASIC19.76■□□□□ 0.75
PCDH9Q9HC56 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 AL031598.1-201ENST00000561511 1773 ntBASIC19.76■□□□□ 0.75
PCDH9Q9HC56 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 AC133681.1-201ENST00000465482 601 ntBASIC19.76■□□□□ 0.75
PCDH9Q9HC56 RPPH1-201ENST00000516869 333 ntBASIC19.76■□□□□ 0.75
PCDH9Q9HC56 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH9Q9HC56 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
PCDH9Q9HC56 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PCDH9Q9HC56 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PCDH9Q9HC56 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH9Q9HC56 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH9Q9HC56 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDH9Q9HC56 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PCDH9Q9HC56 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH9Q9HC56 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PCDH9Q9HC56 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms