Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 AP000974.1-201ENST00000623909 2387 ntBASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 ESRRAP1-201ENST00000400596 1257 ntBASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC68Q9H2F9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 LINC01465-201ENST00000408887 1940 ntBASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 AC104417.2-201ENST00000562989 1793 ntBASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 AC239809.2-201ENST00000415381 517 ntBASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 MTDHP1-201ENST00000605323 784 ntBASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC68Q9H2F9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 AC026471.1-201ENST00000564629 3026 ntBASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 LETM1P2-201ENST00000597330 2178 ntBASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms