Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 APOC1-208ENST00000592535 430 ntTSL 1 (best)16.55■□□□□ 0.242e-7■■■■□ 19.8
XRN2Q9H0D6 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.05■□□□□ 0.162e-7■■■■□ 19.8
XRN2Q9H0D6 APOC1-203ENST00000588802 553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.472e-7■■■■□ 19.8
XRN2Q9H0D6 APOC1-205ENST00000589781 273 ntTSL 3 BASIC11.49□□□□□ -0.572e-7■■■■□ 19.8
XRN2Q9H0D6 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.92e-7■■■■□ 19.8
XRN2Q9H0D6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.058e-7■■■■□ 19.8
XRN2Q9H0D6 ATXN2L-211ENST00000563314 4574 ntTSL 514.53□□□□□ -0.088e-7■■■■□ 19.8
XRN2Q9H0D6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.228e-7■■■■□ 19.8
XRN2Q9H0D6 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.338e-7■■■■□ 19.8
XRN2Q9H0D6 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.378e-7■■■■□ 19.8
XRN2Q9H0D6 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.428e-7■■■■□ 19.8
XRN2Q9H0D6 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.498e-7■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-221ENST00000513230 248 ntTSL 325.4■■□□□ 1.666e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-238ENST00000521116 806 ntTSL 424.16■■□□□ 1.466e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-228ENST00000515714 690 ntTSL 422.55■■□□□ 1.26e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-212ENST00000505087 592 ntTSL 321.37■■□□□ 1.016e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-207ENST00000503105 559 ntTSL 321.37■■□□□ 1.016e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-245ENST00000523137 1563 ntTSL 420.63■□□□□ 0.896e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.63■□□□□ 0.736e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-208ENST00000503664 569 ntTSL 419.63■□□□□ 0.736e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-225ENST00000515158 850 ntTSL 419.47■□□□□ 0.716e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-226ENST00000515446 368 ntTSL 217.76■□□□□ 0.436e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-213ENST00000505811 1155 ntTSL 517.65■□□□□ 0.426e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-249ENST00000524180 997 ntTSL 516.56■□□□□ 0.246e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-209ENST00000504348 594 ntTSL 416.53■□□□□ 0.246e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-220ENST00000513225 805 ntTSL 416.38■□□□□ 0.216e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-215ENST00000508103 610 ntTSL 216.32■□□□□ 0.26e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-211ENST00000504779 792 ntTSL 515.93■□□□□ 0.146e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-218ENST00000510678 1996 ntTSL 515.87■□□□□ 0.136e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-214ENST00000506721 602 ntTSL 515.87■□□□□ 0.136e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-224ENST00000514731 1371 ntTSL 215.83■□□□□ 0.126e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-233ENST00000519455 451 ntTSL 415.69■□□□□ 0.16e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-234ENST00000519707 582 ntTSL 215.59■□□□□ 0.096e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-217ENST00000510431 620 ntTSL 215.59■□□□□ 0.096e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-232ENST00000519056 530 ntTSL 414.95□□□□□ -0.026e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-222ENST00000513972 761 ntTSL 214.91□□□□□ -0.026e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-223ENST00000514332 2444 ntTSL 214.64□□□□□ -0.076e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.66□□□□□ -0.226e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.276e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.36e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC13.16□□□□□ -0.36e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.476e-30■■■■□ 19.8
XRN2Q9H0D6 HNRNPH1-219ENST00000512273 501 ntTSL 410.82□□□□□ -0.686e-30■■■■□ 19.8
XRN2Q9H0D6 SMAD4-215ENST00000592911 475 ntTSL 510.89□□□□□ -0.672e-6■■■■□ 19.8
XRN2Q9H0D6 KLHL24-212ENST00000481126 389 ntTSL 224.69■■□□□ 1.542e-6■■■■□ 19.7
XRN2Q9H0D6 HSPA9-206ENST00000506477 664 ntTSL 219.21■□□□□ 0.671e-7■■■■□ 19.7
XRN2Q9H0D6 HSPA9-204ENST00000504902 887 ntTSL 517.85■□□□□ 0.451e-7■■■■□ 19.7
XRN2Q9H0D6 HSPA9-205ENST00000505110 518 ntTSL 417.21■□□□□ 0.351e-7■■■■□ 19.7
XRN2Q9H0D6 HSPA9-207ENST00000507097 1796 ntTSL 213.91□□□□□ -0.181e-7■■■■□ 19.7
XRN2Q9H0D6 HSPA9-208ENST00000507115 663 ntTSL 311.28□□□□□ -0.61e-7■■■■□ 19.7
XRN2Q9H0D6 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.721e-7■■■■□ 19.7
XRN2Q9H0D6 HSPA9-203ENST00000504810 584 ntTSL 37.59□□□□□ -1.191e-7■■■■□ 19.7
XRN2Q9H0D6 SETD2-203ENST00000412450 4231 ntTSL 211.3□□□□□ -0.68e-7■■■■□ 19.7
XRN2Q9H0D6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.137e-10■■■■□ 19.7
XRN2Q9H0D6 MRPL4-211ENST00000592514 1118 ntAPPRIS ALT2 TSL 527.55■■■□□ 27e-10■■■■□ 19.7
XRN2Q9H0D6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.567e-10■■■■□ 19.7
XRN2Q9H0D6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.43■■□□□ 1.347e-10■■■■□ 19.7
XRN2Q9H0D6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.15■□□□□ 0.987e-10■■■■□ 19.7
XRN2Q9H0D6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.887e-10■■■■□ 19.7
XRN2Q9H0D6 AP2M1-212ENST00000461733 1470 ntTSL 217.54■□□□□ 0.47e-10■■■■□ 19.7
XRN2Q9H0D6 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.127e-10■■■■□ 19.7
XRN2Q9H0D6 FASN-210ENST00000636968 100 ntTSL 520.05■□□□□ 0.88e-8■■■■□ 19.7
XRN2Q9H0D6 BRWD1-214ENST00000484090 429 ntTSL 227.06■■□□□ 1.925e-15■■■■□ 19.7
XRN2Q9H0D6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.77■■□□□ 1.075e-15■■■■□ 19.7
XRN2Q9H0D6 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.335e-15■■■■□ 19.7
XRN2Q9H0D6 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.65□□□□□ -0.385e-15■■■■□ 19.7
XRN2Q9H0D6 BRWD1-212ENST00000470108 1176 ntTSL 37.79□□□□□ -1.165e-15■■■■□ 19.7
XRN2Q9H0D6 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.17□□□□□ -1.265e-15■■■■□ 19.7
XRN2Q9H0D6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.434e-7■■■■□ 19.7
XRN2Q9H0D6 HNRNPL-212ENST00000601449 1918 ntTSL 517.93■□□□□ 0.464e-7■■■■□ 19.7
XRN2Q9H0D6 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC14.79□□□□□ -0.044e-7■■■■□ 19.7
XRN2Q9H0D6 HNRNPL-202ENST00000388749 1952 ntTSL 511.13□□□□□ -0.634e-7■■■■□ 19.7
XRN2Q9H0D6 QTRT1-207ENST00000589488 1571 ntTSL 524.84■■□□□ 1.573e-6■■■■□ 19.7
XRN2Q9H0D6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.443e-6■■■■□ 19.7
XRN2Q9H0D6 QTRT1-202ENST00000421333 1502 ntTSL 221.36■■□□□ 1.013e-6■■■■□ 19.7
XRN2Q9H0D6 SERPINF2-204ENST00000453066 842 ntTSL 520.23■□□□□ 0.831e-14■■■■□ 19.7
XRN2Q9H0D6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.551e-14■■■■□ 19.7
XRN2Q9H0D6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.511e-14■■■■□ 19.7
XRN2Q9H0D6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.26■□□□□ 0.351e-14■■■■□ 19.7
XRN2Q9H0D6 SERPINF2-205ENST00000453723 838 ntTSL 317.23■□□□□ 0.351e-14■■■■□ 19.7
XRN2Q9H0D6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.043e-7■■■■□ 19.7
XRN2Q9H0D6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.03■□□□□ 0.483e-7■■■■□ 19.7
XRN2Q9H0D6 DBNDD1-204ENST00000568330 567 ntTSL 515.82■□□□□ 0.123e-7■■■■□ 19.7
XRN2Q9H0D6 CBFA2T3-211ENST00000570046 284 ntTSL 311.34□□□□□ -0.591e-6■■■■□ 19.7
XRN2Q9H0D6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.044e-7■■■■□ 19.7
XRN2Q9H0D6 NXN-203ENST00000571080 476 ntTSL 519.08■□□□□ 0.644e-7■■■■□ 19.7
XRN2Q9H0D6 NXN-208ENST00000575171 544 ntTSL 211.11□□□□□ -0.634e-7■■■■□ 19.7
XRN2Q9H0D6 USP36-210ENST00000588086 3187 ntAPPRIS ALT2 TSL 1 (best)14.71□□□□□ -0.057e-7■■■■□ 19.7
XRN2Q9H0D6 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC8.2□□□□□ -1.12e-7■■■■□ 19.6
XRN2Q9H0D6 AC015574.1-204ENST00000612595 512 ntTSL 54.98□□□□□ -1.612e-7■■■■□ 19.6
XRN2Q9H0D6 THUMPD3-AS1-209ENST00000518437 240 ntTSL 220.97■□□□□ 0.952e-6■■■■□ 19.6
XRN2Q9H0D6 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.44■□□□□ 0.222e-6■■■■□ 19.6
XRN2Q9H0D6 THUMPD3-AS1-203ENST00000469846 670 ntTSL 314.5□□□□□ -0.092e-6■■■■□ 19.6
XRN2Q9H0D6 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC10.33□□□□□ -0.762e-6■■■■□ 19.6
XRN2Q9H0D6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.6□□□□□ -1.512e-6■■■■□ 19.6
XRN2Q9H0D6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.55□□□□□ -1.522e-6■■■■□ 19.6
XRN2Q9H0D6 THUMPD3-AS1-218ENST00000522525 1867 ntTSL 1 (best)5□□□□□ -1.612e-6■■■■□ 19.6
XRN2Q9H0D6 THUMPD3-AS1-201ENST00000467069 667 ntTSL 54.75□□□□□ -1.652e-6■■■■□ 19.6
XRN2Q9H0D6 THUMPD3-AS1-216ENST00000521708 549 ntTSL 34.72□□□□□ -1.652e-6■■■■□ 19.6
XRN2Q9H0D6 THUMPD3-AS1-207ENST00000494680 544 ntTSL 54.39□□□□□ -1.712e-6■■■■□ 19.6
Retrieved 100 of 21,068 protein–RNA pairs in 101 ms