Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CNTNAP3Q9BZ76 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTNAP3Q9BZ76 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTNAP3Q9BZ76 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTNAP3Q9BZ76 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTNAP3Q9BZ76 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTNAP3Q9BZ76 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTNAP3Q9BZ76 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTNAP3Q9BZ76 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTNAP3Q9BZ76 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNTNAP3Q9BZ76 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 RPSAP43-201ENST00000402237 625 ntBASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 SAPCD2P3-201ENST00000455031 850 ntBASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 AC104819.1-201ENST00000504587 486 ntBASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 ZNF259P1-201ENST00000407656 1365 ntBASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CNTNAP3Q9BZ76 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 AC243591.1-201ENST00000452967 1364 ntBASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 AC004967.1-201ENST00000453589 447 ntBASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 AC093909.1-201ENST00000504731 1122 ntBASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 HLA-A-209ENST00000638375 975 ntBASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CNTNAP3Q9BZ76 AC080038.3-201ENST00000623346 1952 ntBASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 FAM197Y8-203ENST00000450145 560 ntBASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 COX20P2-201ENST00000452636 358 ntBASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP3Q9BZ76 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms