Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 AL645929.1-201ENST00000420084 975 ntBASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 NPAP1P7-201ENST00000613027 823 ntBASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 AC092667.1-201ENST00000434301 2586 ntBASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM2D3Q9BRN9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 RASA4DP-201ENST00000460726 1199 ntBASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM2D3Q9BRN9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TM2D3Q9BRN9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.2
TM2D3Q9BRN9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM2D3Q9BRN9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM2D3Q9BRN9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms