Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.11■□□□□ 0.81
SMOQ99835 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMOQ99835 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMOQ99835 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMOQ99835 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMOQ99835 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMOQ99835 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMOQ99835 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMOQ99835 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.1■□□□□ 0.81
SMOQ99835 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
SMOQ99835 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.1■□□□□ 0.81
SMOQ99835 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMOQ99835 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMOQ99835 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMOQ99835 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SMOQ99835 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.1■□□□□ 0.81
SMOQ99835 CA15P1-201ENST00000481698 905 ntBASIC20.1■□□□□ 0.81
SMOQ99835 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.1■□□□□ 0.81
SMOQ99835 FAM87A-204ENST00000613235 858 ntBASIC20.1■□□□□ 0.81
SMOQ99835 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMOQ99835 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.1■□□□□ 0.81
SMOQ99835 AC092338.2-201ENST00000568827 1415 ntBASIC20.1■□□□□ 0.81
SMOQ99835 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMOQ99835 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SMOQ99835 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.09■□□□□ 0.81
SMOQ99835 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SMOQ99835 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SMOQ99835 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 AC007663.1-201ENST00000438948 1240 ntBASIC20.09■□□□□ 0.81
SMOQ99835 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.09■□□□□ 0.81
SMOQ99835 AC116562.4-202ENST00000641738 218 ntBASIC20.09■□□□□ 0.81
SMOQ99835 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.09■□□□□ 0.81
SMOQ99835 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SMOQ99835 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.09■□□□□ 0.81
SMOQ99835 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 AC141586.3-201ENST00000562166 1838 ntBASIC20.09■□□□□ 0.81
SMOQ99835 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMOQ99835 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SMOQ99835 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMOQ99835 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMOQ99835 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMOQ99835 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMOQ99835 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMOQ99835 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.08■□□□□ 0.81
SMOQ99835 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.08■□□□□ 0.81
SMOQ99835 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SMOQ99835 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMOQ99835 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMOQ99835 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMOQ99835 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMOQ99835 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.08■□□□□ 0.81
SMOQ99835 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.08■□□□□ 0.81
SMOQ99835 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMOQ99835 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMOQ99835 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.08■□□□□ 0.81
SMOQ99835 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.08■□□□□ 0.81
SMOQ99835 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMOQ99835 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
SMOQ99835 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMOQ99835 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMOQ99835 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SMOQ99835 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SMOQ99835 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
SMOQ99835 AC116562.4-201ENST00000641316 2276 ntBASIC20.07■□□□□ 0.8
SMOQ99835 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMOQ99835 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.07■□□□□ 0.8
SMOQ99835 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMOQ99835 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
SMOQ99835 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.07■□□□□ 0.8
SMOQ99835 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.07■□□□□ 0.8
SMOQ99835 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMOQ99835 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.07■□□□□ 0.8
SMOQ99835 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.07■□□□□ 0.8
SMOQ99835 RCN1P1-201ENST00000400413 996 ntBASIC20.07■□□□□ 0.8
SMOQ99835 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.07■□□□□ 0.8
SMOQ99835 SLC25A3P1-201ENST00000443844 931 ntBASIC20.07■□□□□ 0.8
SMOQ99835 CCR12P-201ENST00000446203 998 ntBASIC20.07■□□□□ 0.8
SMOQ99835 AC128688.1-201ENST00000487626 519 ntBASIC20.07■□□□□ 0.8
SMOQ99835 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.07■□□□□ 0.8
SMOQ99835 AL353719.1-201ENST00000566847 864 ntBASIC20.07■□□□□ 0.8
SMOQ99835 AC005363.2-201ENST00000618631 242 ntBASIC20.07■□□□□ 0.8
SMOQ99835 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SMOQ99835 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SMOQ99835 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMOQ99835 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.07■□□□□ 0.8
SMOQ99835 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms