Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL19Q99731 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL19Q99731 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL19Q99731 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.17■□□□□ 0.18
CCL19Q99731 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL19Q99731 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL19Q99731 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL19Q99731 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.16■□□□□ 0.18
CCL19Q99731 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL19Q99731 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCL19Q99731 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL19Q99731 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.16■□□□□ 0.18
CCL19Q99731 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL19Q99731 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CCL19Q99731 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCL19Q99731 AC092119.3-201ENST00000612618 583 ntBASIC16.16■□□□□ 0.18
CCL19Q99731 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCL19Q99731 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCL19Q99731 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCL19Q99731 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL19Q99731 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL19Q99731 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL19Q99731 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL19Q99731 AP005212.1-201ENST00000581547 1997 ntBASIC16.15■□□□□ 0.18
CCL19Q99731 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL19Q99731 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CCL19Q99731 RASA4DP-201ENST00000460726 1199 ntBASIC16.15■□□□□ 0.18
CCL19Q99731 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.15■□□□□ 0.18
CCL19Q99731 MIR3652-201ENST00000579335 131 ntBASIC16.15■□□□□ 0.18
CCL19Q99731 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.15■□□□□ 0.18
CCL19Q99731 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCL19Q99731 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL19Q99731 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCL19Q99731 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCL19Q99731 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCL19Q99731 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL19Q99731 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL19Q99731 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CCL19Q99731 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
CCL19Q99731 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.14■□□□□ 0.17
CCL19Q99731 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 HBZP1-201ENST00000354915 429 ntBASIC16.14■□□□□ 0.17
CCL19Q99731 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.14■□□□□ 0.17
CCL19Q99731 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.14■□□□□ 0.17
CCL19Q99731 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCL19Q99731 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.14■□□□□ 0.17
CCL19Q99731 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.14■□□□□ 0.17
CCL19Q99731 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCL19Q99731 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
CCL19Q99731 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.14■□□□□ 0.17
CCL19Q99731 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL19Q99731 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL19Q99731 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL19Q99731 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL19Q99731 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL19Q99731 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CCL19Q99731 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL19Q99731 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms