Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 AC005332.7-201ENST00000614046 2005 ntBASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUDCD1Q96RS6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 C1QL1P1-201ENST00000568105 661 ntBASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 TREX1-205ENST00000625293 1783 ntBASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
NUDCD1Q96RS6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NUDCD1Q96RS6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
NUDCD1Q96RS6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 AC093503.3-201ENST00000624917 2352 ntBASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD1Q96RS6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms