Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS4Q96RK4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS4Q96RK4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS4Q96RK4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS4Q96RK4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 AC098818.2-201ENST00000564925 2320 ntBASIC18.15■□□□□ 0.5
BBS4Q96RK4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 AC124016.1-201ENST00000609552 612 ntBASIC18.15■□□□□ 0.5
BBS4Q96RK4 AC110285.5-201ENST00000611501 352 ntBASIC18.15■□□□□ 0.5
BBS4Q96RK4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BBS4Q96RK4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.15■□□□□ 0.5
BBS4Q96RK4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.14■□□□□ 0.5
BBS4Q96RK4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BBS4Q96RK4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BBS4Q96RK4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
BBS4Q96RK4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
BBS4Q96RK4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
BBS4Q96RK4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BBS4Q96RK4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BBS4Q96RK4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BBS4Q96RK4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BBS4Q96RK4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BBS4Q96RK4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 FAM201B-201ENST00000458407 597 ntBASIC18.14■□□□□ 0.49
BBS4Q96RK4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BBS4Q96RK4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BBS4Q96RK4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BBS4Q96RK4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BBS4Q96RK4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.14■□□□□ 0.49
BBS4Q96RK4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 AC133681.1-201ENST00000465482 601 ntBASIC18.13■□□□□ 0.49
BBS4Q96RK4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 C1QBPP2-201ENST00000528754 825 ntBASIC18.13■□□□□ 0.49
BBS4Q96RK4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 AL160286.2-201ENST00000567150 934 ntBASIC18.13■□□□□ 0.49
BBS4Q96RK4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms