Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 AL356652.1-201ENST00000615962 565 ntBASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IPQ96QF0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 ANO7L1-203ENST00000602586 1720 ntBASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 BX842568.3-201ENST00000418104 571 ntBASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 AL031963.3-201ENST00000606441 850 ntBASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IPQ96QF0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 AC141586.5-201ENST00000624546 2050 ntBASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 PHGDH-210ENST00000641115 1638 ntBASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 AC124067.4-201ENST00000519691 2379 ntBASIC18.66■□□□□ 0.58
RAB3IPQ96QF0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 AC126763.1-201ENST00000552015 2118 ntBASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 AL136116.3-201ENST00000402907 1138 ntBASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms