Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 AC092597.1-201ENST00000487352 616 ntBASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC3BQ96PB8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC3BQ96PB8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 TSPY21P-201ENST00000433481 731 ntBASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 HCG4P8-203ENST00000443049 980 ntBASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 AC069148.1-201ENST00000608741 768 ntBASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3BQ96PB8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC3BQ96PB8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC3BQ96PB8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC3BQ96PB8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC3BQ96PB8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC3BQ96PB8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRC3BQ96PB8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC3BQ96PB8 HBZP1-201ENST00000354915 429 ntBASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 AL023284.2-201ENST00000405850 579 ntBASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 CLEC4GP1-201ENST00000596555 870 ntBASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3BQ96PB8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms