Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.81■□□□□ 0.6
CFAP54Q96N23 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CFAP54Q96N23 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP54Q96N23 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 AL031284.1-201ENST00000419297 478 ntBASIC18.8■□□□□ 0.6
CFAP54Q96N23 GPX1P2-201ENST00000429271 606 ntBASIC18.8■□□□□ 0.6
CFAP54Q96N23 AF238378.1-201ENST00000526806 358 ntBASIC18.8■□□□□ 0.6
CFAP54Q96N23 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.8■□□□□ 0.6
CFAP54Q96N23 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.8■□□□□ 0.6
CFAP54Q96N23 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 KRT8P20-201ENST00000423953 1409 ntBASIC18.8■□□□□ 0.6
CFAP54Q96N23 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CFAP54Q96N23 TSPY22P-201ENST00000427496 604 ntBASIC18.8■□□□□ 0.6
CFAP54Q96N23 LINC00265-3P-201ENST00000447588 903 ntBASIC18.8■□□□□ 0.6
CFAP54Q96N23 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.8■□□□□ 0.6
CFAP54Q96N23 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.8■□□□□ 0.6
CFAP54Q96N23 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CFAP54Q96N23 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CFAP54Q96N23 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CFAP54Q96N23 TFP1-202ENST00000475455 1573 ntBASIC18.79■□□□□ 0.6
CFAP54Q96N23 AC093525.10-201ENST00000625130 1569 ntBASIC18.79■□□□□ 0.6
CFAP54Q96N23 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.79■□□□□ 0.6
CFAP54Q96N23 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.79■□□□□ 0.6
CFAP54Q96N23 AC148477.8-201ENST00000624298 468 ntBASIC18.79■□□□□ 0.6
CFAP54Q96N23 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CFAP54Q96N23 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CFAP54Q96N23 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.79■□□□□ 0.6
CFAP54Q96N23 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CFAP54Q96N23 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CFAP54Q96N23 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.79■□□□□ 0.6
CFAP54Q96N23 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.79■□□□□ 0.6
CFAP54Q96N23 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.79■□□□□ 0.6
CFAP54Q96N23 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.79■□□□□ 0.6
CFAP54Q96N23 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CFAP54Q96N23 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.79■□□□□ 0.6
CFAP54Q96N23 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CFAP54Q96N23 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CFAP54Q96N23 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CFAP54Q96N23 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CFAP54Q96N23 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.78■□□□□ 0.6
CFAP54Q96N23 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CFAP54Q96N23 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.78■□□□□ 0.6
CFAP54Q96N23 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.78■□□□□ 0.6
CFAP54Q96N23 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.78■□□□□ 0.6
CFAP54Q96N23 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.78■□□□□ 0.6
CFAP54Q96N23 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.78■□□□□ 0.6
CFAP54Q96N23 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CFAP54Q96N23 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CFAP54Q96N23 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CFAP54Q96N23 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CFAP54Q96N23 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CFAP54Q96N23 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CFAP54Q96N23 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CFAP54Q96N23 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.78■□□□□ 0.6
CFAP54Q96N23 IGHV3-22-201ENST00000520721 359 ntBASIC18.78■□□□□ 0.6
CFAP54Q96N23 AC027601.4-201ENST00000611259 610 ntBASIC18.78■□□□□ 0.6
CFAP54Q96N23 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CFAP54Q96N23 AC004967.1-201ENST00000453589 447 ntBASIC18.77■□□□□ 0.6
CFAP54Q96N23 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.77■□□□□ 0.6
CFAP54Q96N23 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.77■□□□□ 0.6
CFAP54Q96N23 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CFAP54Q96N23 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CFAP54Q96N23 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CFAP54Q96N23 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CFAP54Q96N23 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CFAP54Q96N23 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CFAP54Q96N23 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.77■□□□□ 0.6
CFAP54Q96N23 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.77■□□□□ 0.6
CFAP54Q96N23 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.77■□□□□ 0.6
CFAP54Q96N23 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.77■□□□□ 0.6
CFAP54Q96N23 TP73-AS1-207ENST00000624167 988 ntBASIC18.77■□□□□ 0.6
CFAP54Q96N23 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CFAP54Q96N23 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CFAP54Q96N23 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.77■□□□□ 0.59
CFAP54Q96N23 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CFAP54Q96N23 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.77■□□□□ 0.59
CFAP54Q96N23 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CFAP54Q96N23 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.77■□□□□ 0.59
CFAP54Q96N23 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CFAP54Q96N23 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
CFAP54Q96N23 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CFAP54Q96N23 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CFAP54Q96N23 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.76■□□□□ 0.59
CFAP54Q96N23 AC018553.1-201ENST00000616682 1458 ntBASIC18.76■□□□□ 0.59
CFAP54Q96N23 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CFAP54Q96N23 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.76■□□□□ 0.59
CFAP54Q96N23 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.76■□□□□ 0.59
CFAP54Q96N23 DNAJB3-202ENST00000449667 1266 ntBASIC18.76■□□□□ 0.59
CFAP54Q96N23 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms