Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 AL591742.1-201ENST00000604433 565 ntBASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 TERF1P2-201ENST00000583350 1212 ntBASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 LINC02228-203ENST00000641970 1355 ntBASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1LQ96KA5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 UBE2DNL-204ENST00000602536 740 ntBASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 ESPNP-201ENST00000270691 2015 ntBASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1LQ96KA5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 AC027612.3-201ENST00000413684 1047 ntBASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 AC126763.1-201ENST00000552015 2118 ntBASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1LQ96KA5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 YBX1P1-201ENST00000445822 960 ntBASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.35■□□□□ 0.53
CLPTM1LQ96KA5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms