Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC39Q96DD0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 UNC93B4-201ENST00000505679 747 ntBASIC19.34■□□□□ 0.69
LRRC39Q96DD0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 AC009113.1-201ENST00000570267 2443 ntBASIC19.34■□□□□ 0.69
LRRC39Q96DD0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRC39Q96DD0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC39Q96DD0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC39Q96DD0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC39Q96DD0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC39Q96DD0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LRRC39Q96DD0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
LRRC39Q96DD0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC39Q96DD0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC39Q96DD0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRC39Q96DD0 AC069152.1-201ENST00000438030 544 ntBASIC19.33■□□□□ 0.68
LRRC39Q96DD0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC39Q96DD0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRC39Q96DD0 AC098934.4-201ENST00000564127 592 ntBASIC19.33■□□□□ 0.68
LRRC39Q96DD0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC39Q96DD0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRC39Q96DD0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC39Q96DD0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC39Q96DD0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRC39Q96DD0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC39Q96DD0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRC39Q96DD0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 PRKY-204ENST00000533551 1019 ntBASIC19.32■□□□□ 0.68
LRRC39Q96DD0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC39Q96DD0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 POM121L13P-201ENST00000422362 380 ntBASIC19.31■□□□□ 0.68
LRRC39Q96DD0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC39Q96DD0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms