Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 ANO7L1-203ENST00000602586 1720 ntBASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 CROCCP5-201ENST00000436658 830 ntBASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A1Q8WWI5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 TUBB8P6-201ENST00000436895 1288 ntBASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A1Q8WWI5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 HLA-B-256ENST00000639848 1089 ntBASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 AC092368.3-202ENST00000574180 1591 ntBASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A1Q8WWI5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 AC083906.2-201ENST00000511578 360 ntBASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC44A1Q8WWI5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms