Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD5Q8TDI0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
CHD5Q8TDI0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD5Q8TDI0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHD5Q8TDI0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.39■□□□□ 0.69
CHD5Q8TDI0 AC008622.2-201ENST00000617006 1229 ntBASIC19.39■□□□□ 0.69
CHD5Q8TDI0 AC133561.5-201ENST00000635547 218 ntBASIC19.39■□□□□ 0.69
CHD5Q8TDI0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD5Q8TDI0 AL049812.1-201ENST00000432563 2267 ntBASIC19.39■□□□□ 0.69
CHD5Q8TDI0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD5Q8TDI0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHD5Q8TDI0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 ECEL1P2-202ENST00000465689 757 ntBASIC19.38■□□□□ 0.69
CHD5Q8TDI0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 MTMR9LP-203ENST00000426597 1545 ntBASIC19.38■□□□□ 0.69
CHD5Q8TDI0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD5Q8TDI0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 RN7SL850P-201ENST00000579959 291 ntBASIC19.37■□□□□ 0.69
CHD5Q8TDI0 AC010653.2-201ENST00000623505 997 ntBASIC19.37■□□□□ 0.69
CHD5Q8TDI0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD5Q8TDI0 LINC01568-207ENST00000641790 1380 ntBASIC19.37■□□□□ 0.69
CHD5Q8TDI0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 INGX-201ENST00000359239 846 ntBASIC19.36■□□□□ 0.69
CHD5Q8TDI0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 AC128688.1-201ENST00000487626 519 ntBASIC19.36■□□□□ 0.69
CHD5Q8TDI0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.36■□□□□ 0.69
CHD5Q8TDI0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD5Q8TDI0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 FEM1AP3-201ENST00000403722 1741 ntBASIC19.35■□□□□ 0.69
CHD5Q8TDI0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 HMGA1P5-201ENST00000412453 271 ntBASIC19.35■□□□□ 0.69
CHD5Q8TDI0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD5Q8TDI0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CHD5Q8TDI0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms