Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 AL355385.1-201ENST00000606123 409 ntBASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 FAM220CP-201ENST00000395253 831 ntBASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 LINC02084-201ENST00000606069 1096 ntBASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 AL773604.1-201ENST00000617417 272 ntBASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 AC055717.3-201ENST00000622967 595 ntBASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 AC006128.1-201ENST00000624704 1661 ntBASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 AL592071.1-201ENST00000611956 408 ntBASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC12.91□□□□□ -0.34
ALMS1Q8TCU4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 PGAM5P1-201ENST00000518923 814 ntBASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 PMS2P2-201ENST00000425039 1128 ntBASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ALMS1Q8TCU4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC12.9□□□□□ -0.35
ALMS1Q8TCU4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 Z69720.1-201ENST00000601483 472 ntBASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 AC079834.2-201ENST00000609776 1949 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms