Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 UBE2SP1-201ENST00000450587 669 ntBASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 AC073195.1-201ENST00000607241 877 ntBASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 KRT16P1-201ENST00000399124 1418 ntBASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.29■□□□□ 0.84
TMEM35BQ8NCS4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 FEM1AP3-201ENST00000403722 1741 ntBASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 CR392000.1-201ENST00000624770 1228 ntBASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM35BQ8NCS4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 AL049812.1-201ENST00000432563 2267 ntBASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 TSPY23P-201ENST00000440136 739 ntBASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM35BQ8NCS4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TMEM35BQ8NCS4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMEM35BQ8NCS4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM35BQ8NCS4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms