Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SLX4Q8IY92 AC020907.5-201ENST00000624372 1936 ntBASIC23.38■■□□□ 1.33
SLX4Q8IY92 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLX4Q8IY92 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLX4Q8IY92 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
SLX4Q8IY92 AC073314.1-201ENST00000568729 2216 ntBASIC23.38■■□□□ 1.33
SLX4Q8IY92 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SLX4Q8IY92 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.37■■□□□ 1.33
SLX4Q8IY92 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.37■■□□□ 1.33
SLX4Q8IY92 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SLX4Q8IY92 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.37■■□□□ 1.33
SLX4Q8IY92 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SLX4Q8IY92 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLX4Q8IY92 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.37■■□□□ 1.33
SLX4Q8IY92 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLX4Q8IY92 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLX4Q8IY92 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
SLX4Q8IY92 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SLX4Q8IY92 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
SLX4Q8IY92 AL136038.4-201ENST00000603606 1261 ntBASIC23.37■■□□□ 1.33
SLX4Q8IY92 GPALPP1-207ENST00000611650 899 ntBASIC23.37■■□□□ 1.33
SLX4Q8IY92 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.37■■□□□ 1.33
SLX4Q8IY92 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLX4Q8IY92 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.37■■□□□ 1.33
SLX4Q8IY92 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SLX4Q8IY92 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLX4Q8IY92 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.36■■□□□ 1.33
SLX4Q8IY92 MRPL3P1-201ENST00000400109 1033 ntBASIC23.36■■□□□ 1.33
SLX4Q8IY92 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.36■■□□□ 1.33
SLX4Q8IY92 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.36■■□□□ 1.33
SLX4Q8IY92 TOB2P1-201ENST00000469761 992 ntBASIC23.36■■□□□ 1.33
SLX4Q8IY92 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.36■■□□□ 1.33
SLX4Q8IY92 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLX4Q8IY92 AP002469.2-201ENST00000531724 424 ntBASIC23.36■■□□□ 1.33
SLX4Q8IY92 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SLX4Q8IY92 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SLX4Q8IY92 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLX4Q8IY92 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLX4Q8IY92 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.36■■□□□ 1.33
SLX4Q8IY92 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLX4Q8IY92 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SLX4Q8IY92 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
SLX4Q8IY92 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLX4Q8IY92 AC006538.3-201ENST00000612495 578 ntBASIC23.36■■□□□ 1.33
SLX4Q8IY92 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.36■■□□□ 1.33
SLX4Q8IY92 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.35■■□□□ 1.33
SLX4Q8IY92 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.35■■□□□ 1.33
SLX4Q8IY92 LINC00265-3P-201ENST00000447588 903 ntBASIC23.35■■□□□ 1.33
SLX4Q8IY92 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.35■■□□□ 1.33
SLX4Q8IY92 MIR3180-5-201ENST00000583743 153 ntBASIC23.35■■□□□ 1.33
SLX4Q8IY92 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.35■■□□□ 1.33
SLX4Q8IY92 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.35■■□□□ 1.33
SLX4Q8IY92 AC120114.3-201ENST00000611923 658 ntBASIC23.35■■□□□ 1.33
SLX4Q8IY92 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLX4Q8IY92 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.35■■□□□ 1.33
SLX4Q8IY92 AL512408.1-201ENST00000569378 2000 ntBASIC23.34■■□□□ 1.33
SLX4Q8IY92 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLX4Q8IY92 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
SLX4Q8IY92 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SLX4Q8IY92 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLX4Q8IY92 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.34■■□□□ 1.33
SLX4Q8IY92 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLX4Q8IY92 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLX4Q8IY92 ZNF815P-204ENST00000434898 1737 ntBASIC23.34■■□□□ 1.33
SLX4Q8IY92 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SLX4Q8IY92 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLX4Q8IY92 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLX4Q8IY92 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLX4Q8IY92 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLX4Q8IY92 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLX4Q8IY92 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.34■■□□□ 1.33
SLX4Q8IY92 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLX4Q8IY92 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.34■■□□□ 1.33
SLX4Q8IY92 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLX4Q8IY92 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SLX4Q8IY92 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.33■■□□□ 1.33
SLX4Q8IY92 MIR662-201ENST00000384847 95 ntBASIC23.33■■□□□ 1.33
SLX4Q8IY92 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms