Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SMC5Q8IY18 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.73■■□□□ 1.39
SMC5Q8IY18 POU5F1P3-201ENST00000428824 1078 ntBASIC23.73■■□□□ 1.39
SMC5Q8IY18 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.73■■□□□ 1.39
SMC5Q8IY18 AC083906.6-201ENST00000641366 219 ntBASIC23.73■■□□□ 1.39
SMC5Q8IY18 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
SMC5Q8IY18 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMC5Q8IY18 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.73■■□□□ 1.39
SMC5Q8IY18 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC5Q8IY18 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC5Q8IY18 NEFHP1-201ENST00000412845 2629 ntBASIC23.72■■□□□ 1.39
SMC5Q8IY18 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC5Q8IY18 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC5Q8IY18 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.72■■□□□ 1.39
SMC5Q8IY18 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.72■■□□□ 1.39
SMC5Q8IY18 AL445675.2-201ENST00000620291 557 ntBASIC23.72■■□□□ 1.39
SMC5Q8IY18 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC5Q8IY18 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC5Q8IY18 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.72■■□□□ 1.39
SMC5Q8IY18 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SMC5Q8IY18 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC5Q8IY18 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC23.72■■□□□ 1.39
SMC5Q8IY18 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.72■■□□□ 1.39
SMC5Q8IY18 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC5Q8IY18 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.71■■□□□ 1.39
SMC5Q8IY18 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.71■■□□□ 1.39
SMC5Q8IY18 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.71■■□□□ 1.39
SMC5Q8IY18 AC110285.5-201ENST00000611501 352 ntBASIC23.71■■□□□ 1.39
SMC5Q8IY18 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMC5Q8IY18 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
SMC5Q8IY18 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
SMC5Q8IY18 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.71■■□□□ 1.39
SMC5Q8IY18 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
SMC5Q8IY18 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.39
SMC5Q8IY18 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
SMC5Q8IY18 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SMC5Q8IY18 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMC5Q8IY18 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMC5Q8IY18 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMC5Q8IY18 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMC5Q8IY18 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMC5Q8IY18 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 AC009113.1-201ENST00000570267 2443 ntBASIC23.7■■□□□ 1.38
SMC5Q8IY18 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMC5Q8IY18 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC23.7■■□□□ 1.38
SMC5Q8IY18 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC5Q8IY18 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC5Q8IY18 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC5Q8IY18 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC5Q8IY18 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SMC5Q8IY18 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.69■■□□□ 1.38
SMC5Q8IY18 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.69■■□□□ 1.38
SMC5Q8IY18 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SMC5Q8IY18 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC5Q8IY18 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
SMC5Q8IY18 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC5Q8IY18 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC5Q8IY18 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.69■■□□□ 1.38
SMC5Q8IY18 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC5Q8IY18 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.69■■□□□ 1.38
SMC5Q8IY18 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.69■■□□□ 1.38
SMC5Q8IY18 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.69■■□□□ 1.38
SMC5Q8IY18 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.69■■□□□ 1.38
SMC5Q8IY18 MIR4651-201ENST00000582622 73 ntBASIC23.69■■□□□ 1.38
SMC5Q8IY18 AC006058.3-201ENST00000606217 1069 ntBASIC23.69■■□□□ 1.38
SMC5Q8IY18 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
SMC5Q8IY18 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.69■■□□□ 1.38
SMC5Q8IY18 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC23.69■■□□□ 1.38
SMC5Q8IY18 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23.68■■□□□ 1.38
SMC5Q8IY18 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.68■■□□□ 1.38
SMC5Q8IY18 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SMC5Q8IY18 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms